LOCUS BC001604 2901 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens NCK-associated protein 1-like, mRNA (cDNA clone
IMAGE:3543376), partial cds.
ACCESSION BC001604
VERSION BC001604.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2901)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2901)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 20, 2005 this sequence version replaced BC001604.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: m Column: 14.
FEATURES Location/Qualifiers
source 1..2901
/db_xref="H-InvDB:HIT000030511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3543376"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2901
/gene="NCKAP1L"
/db_xref="GeneID:3071"
/db_xref="HGNC:HGNC:4862"
/db_xref="MIM:141180"
CDS <1..2599
/gene="NCKAP1L"
/codon_start=2
/product="NCKAP1L protein"
/protein_id="AAH01604.3"
/db_xref="GeneID:3071"
/db_xref="HGNC:HGNC:4862"
/db_xref="MIM:141180"
/translation="GFLLCHGCLNSNSQCQKLWKLCLQGSLYITLIREDVLQVHKVTE
DLFSSLKGYGKRVADIKESKEHVIANSGQFHCQRRQFLRMAVKELETVLADEPGLLGP
KALFAFMALSFIRDEVTWLVRHTENVTKTKTPEDYADSSIAELLFLLEGIRSLVRRHI
KVIQQYHLQYLARFDALVLSDIIQNLSVCPEEESIIMSSFVSILSSLNLKQVDNGEKF
EFSGLRLDWFRLQAYTSVAKAPLHLHENPDLAKVMNLIVFHSRMLDSVEKLLVETSDL
STFCFHLRIFEKMFAMTLEESAMLRYAIAFPLICAHFVHCTHEMCPEEYPHLKNHGLH
HCNSFLEELAKQTSNCVLEICAEQRNLSEQLLPKHCATTISKAKNKKTRKQRQTPRKG
EPERDKPGAESHRKNRSIVTNMDKLHLNLTELALTMNHVYSFSVFEHTIFPSEYLSSH
LEARLNRAIVWLAGYNATTQEIVRPSELLAGVKAYIGFIQSLAQFLGADASRVIRNAL
LQQTQPLDSCGEQTITTLYTNWYLESLLRQASSGTIILSPAMQAFVSLPREGEQNFSA
EEFSDISEMRALAELLGPYGMKFLSENLMWHVTSQIVELKKLVVENMDILVQIRSNFS
KPDLMASLLPQLTGAENVLKRMTIIGVILSFRAMAQEGLREVFSSHCPFLMGPIECLK
EFVTPDTDIKVTLSIFELASAAGVGCDIDPALVAAIANLKADTSSPEEEYKVACLLLI
FLAVSLPLLATDPSSFYSIEKDGYNNNIHCLTKAIIQVSAALFTLYNKNIETHLKEFL
VVASVSLLQLGQETDKLKTRNRESISLLMRLVVEESSFLTLDMLESCFPYVLLRNAYR
EVSRAFHLN"
BASE COUNT 730 a 724 c 740 g 707 t
ORIGIN
1 tgggtttctt ctttgtcatg ggtgcctcaa ctccaatagc cagtgccaga agctgtggaa
61 gctgtgtctg cagggctccc tctacatcac ccttatccgt gaggatgtgc tgcaggtgca
121 caaagtcacc gaggacctgt ttagcagttt gaaagggtat ggcaagagag tggcagacat
181 aaaggagagc aaggaacatg taattgcaaa cagtggccag tttcattgtc aacggcggca
241 atttctgcgg atggcagtga aggagctgga gactgtgttg gctgatgaac cgggactact
301 gggtcctaag gctctttttg ctttcatggc cctgtccttc attcgtgatg aggtcacctg
361 gctggttcgc cacacagaga atgtcaccaa gacaaagaca cctgaggact atgctgactc
421 gagcattgca gagctacttt tcttgttgga ggggattagg tctctggtcc gaagacacat
481 caaagtgata cagcaatacc accttcagta cttggcaaga tttgatgctc ttgtgctcag
541 tgacatcatt cagaacttgt ctgtgtgtcc agaggaggag tccatcatca tgtcctcatt
601 cgtcagtatc ctctcctctc tgaatctcaa acaagttgat aatggagaaa aatttgaatt
661 ctcaggattg aggctggact ggttccgcct acaggcatac actagcgtgg ctaaggcccc
721 tctgcacctg catgagaacc ctgacttagc caaggtgatg aacctcattg tcttccactc
781 ccgaatgctg gactccgtag aaaaattgct ggtggaaact tctgatctgt ctactttctg
841 ctttcatctt cgtatctttg agaagatgtt tgccatgacc ttggaggaat ctgccatgtt
901 gcgttatgcc attgctttcc ccctgatttg tgctcacttt gtccactgca ctcatgagat
961 gtgcccagag gagtaccccc acctcaagaa ccatggtctt caccactgca actccttcct
1021 ggaagagttg gccaagcaga ccagcaattg cgtcctggag atctgtgctg agcagcgaaa
1081 cctgagcgag cagcttctac ctaagcactg tgccactaca atcagcaaag ccaagaacaa
1141 gaaaaccagg aagcagaggc agactcccag aaaaggagag cccgagaggg acaagccagg
1201 agctgagagt caccggaaga accgcagcat tgtcaccaac atggacaagc tacacctaaa
1261 cttgacagaa ctggcactga caatgaatca tgtatacagt ttctccgtgt ttgaacatac
1321 tatcttccct tctgagtacc tcagcagcca cctggaggcc agactcaaca gagccattgt
1381 gtggctggct ggctacaatg ccacgaccca ggagatcgta cggccttctg agctgttggc
1441 aggagtcaaa gcatacattg gtttcataca gtcactggcc cagtttttgg gtgcagatgc
1501 ttccagagtc atccgcaacg ccctcctgca gcagacacaa ccactggatt cctgtgggga
1561 acagacaatc accacactct acacaaactg gtacctggaa agtctgctta gacaggcaag
1621 cagtgggacc atcatcctct ccccagccat gcaggccttc gtcagcctgc ccagagaagg
1681 ggagcagaac ttcagtgcag aggagttctc tgacatctct gagatgcggg ccttggcaga
1741 actcctgggc ccctatggca tgaagttcct gagtgaaaac ctgatgtggc atgtgacctc
1801 tcagattgtg gagctgaaga agctggtggt ggaaaacatg gacatacttg ttcagatcag
1861 atccaacttt agcaagccgg acttgatggc ttccctgctg ccccagctga caggggctga
1921 aaatgtgcta aagcgcatga ccatcattgg ggttatcctc agtttcaggg ccatggccca
1981 agagggactt cgggaggttt tctcctccca ctgcccattt cttatgggtc ccattgagtg
2041 cttgaaggag tttgtcactc cagacacaga catcaaggtg accttgagta tctttgagct
2101 ggcatctgct gcaggtgtgg gctgtgacat tgacccagcc ttggtggctg ccattgctaa
2161 tctgaaagct gatacttcat ctcctgagga ggaatataag gtggcctgcc tgctcttgat
2221 ctttctggca gtttccctcc cactccttgc cactgaccct tcttcctttt atagcattga
2281 gaaggatggt tacaacaaca atattcattg cttgaccaaa gccatcatcc aggtgtctgc
2341 tgccctcttc acgctctaca acaagaacat tgaaactcac ctcaaggaat ttctggtggt
2401 ggcctctgtc agcctcttgc agctgggcca ggagactgac aagcttaaaa ccagaaatcg
2461 agaatccatt tctctgctca tgcgcttggt ggtggaggag tcatccttcc tgaccctgga
2521 catgctggag tcctgtttcc cttatgtcct gcttcgaaat gcctatcggg aggtgtctcg
2581 ggccttccac ctaaactgaa tgcctgccag tacccactga agagcccttt ggaccttcct
2641 aaacccttgc catagtggaa gctgtggtca ctttcgcagg gggtgggaat ggggtggggt
2701 cactaaggag agagggtcag gagccagagt tgatgagcag atctgtggaa gaacaatcca
2761 gggctgagaa atcgtagagc agtgaggcag gctgggagca tggaggacag cttatggaaa
2821 aagttagggc gtggggccac atgtgtgaat tttacaatga aaaaaggagt aacgtacaag
2881 tataaaaaaa aaaaaaaaaa a
//