LOCUS BC001585 2012 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ligatin, mRNA (cDNA clone MGC:5626 IMAGE:3463026), complete cds. ACCESSION BC001585 VERSION BC001585.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2012) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2012) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-DEC-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 4 Row: l Column: 18. FEATURES Location/Qualifiers source 1..2012 /db_xref="H-InvDB:HIT000030499" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:5626 IMAGE:3463026" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2012 /gene="LGTN" /gene_synonym="HCA56" /db_xref="GeneID:1939" /db_xref="HGNC:HGNC:6583" /db_xref="MIM:151625" CDS 108..1862 /gene="LGTN" /gene_synonym="HCA56" /codon_start=1 /product="ligatin" /protein_id="AAH01585.1" /db_xref="GeneID:1939" /db_xref="HGNC:HGNC:6583" /db_xref="MIM:151625" /translation="MFAKAFRVKSNTAIKGSDRRKLRADVTTAFPTLGTDQVSELVPG KEELNIVKLYAHKGDAVTVYVSGGNPILFELEKNLYPTVYTLWSYPDLLPTFTTWPLV LEKLVGGADLMLPGLVMPPAGLPQVQKGDLCAISLVGNRAPVAIGVAAMSTAEMLTSG LKGRGFSVLHTYQDHLWRSGNKSSPPSIAPLALDSADLSEEKGSVQMDSTLQGDMRHM TLEGEEENGEVHQAREDKSLSEAPEDTSTRGLNQDSTDSKTLQEQMDELLQQCFLHAL KCRVKKADLPLLTSTFLGSHMFSCCPEGRQLDIKKSSYKKLSKFLQQMQQEQIIQVKE LSKGVESIVAVDWKHPRITSFVIPEPSPTSQTIQEGSREQPYHPPDIKPLYCVPASMT LLFQESGHKKGSFLEGSEVRTIVINYAKKNDLVDADNKNLVRLDPILCDCILEKNEQH TVMKLPWDSLLTRCLEKLQPAYQVTLPGQEPIVKKGRICPIDITLAQRASNKKVTVVR NLEAYGLDPYSVAAILQQRCQASTTVNPAPGAKDSLQVQIQGNQVHHLGWLLLEEYQL PRKHIQGLEKALKPGKKK" BASE COUNT 540 a 533 c 502 g 437 t ORIGIN 1 ccccagcatg gctgccccca cggctgaggg cctggcagct gctgcgccct cgctttcttg 61 acattccctg gcttctgtgc tctcttcccc aggccacccc agcagacatg tttgccaagg 121 cctttcgggt caagtccaac acggccatca aggggtcgga caggagaaag cttcgagctg 181 atgtgacaac tgctttcccc acccttggaa ctgatcaagt ctctgagtta gtacctggaa 241 aggaggagct caacattgtg aagttgtatg ctcacaaagg ggatgcagtg actgtgtacg 301 tgagtggtgg taaccccatc ctctttgaac tggagaaaaa tctgtatcca acagtgtaca 361 cgctgtggtc ctatcctgat cttctgccaa cctttacaac atggcctctg gtgctcgaga 421 aactggtagg gggagcagat ttgatgctgc ctggactggt gatgccccct gctggtctgc 481 ctcaggtaca gaagggcgac ctctgtgcca tttctttggt ggggaacaga gcccctgtag 541 ccattggagt tgcagccatg tccacagctg agatgctcac gtcaggcctg aagggaaggg 601 gcttctctgt gctccacact taccaggacc acttgtggcg gtctggaaac aagtcctctc 661 caccttccat tgctccactg gccctggatt cagcagatct cagtgaagag aaggggtctg 721 tccagatgga ctccaccctg cagggagaca tgaggcacat gaccctggag ggggaagagg 781 agaatgggga ggttcaccag gcacgtgaag acaagtctct ctcagaagcc ccagaagaca 841 ccagcaccag gggcctgaac caagactcca cagatagcaa aacgcttcaa gaacaaatgg 901 atgagctgtt acagcaatgc ttcttacatg ccttgaagtg ccgagtcaaa aaggctgacc 961 tccctttact caccagcact ttccttggca gccacatgtt ctcctgctgc cccgaaggac 1021 gacaactgga cataaagaag tcaagctaca aaaagctctc taagttcctg cagcaaatgc 1081 agcaggagca gattatacag gtgaaggagc tgagcaaagg ggtggagagc attgtggctg 1141 tggactggaa acacccgagg attacatctt tcgtcatacc cgagccctcc ccgacctccc 1201 agactatcca ggagggtagc agggaacagc cctatcaccc tccagatata aaacccctct 1261 actgtgtccc agccagcatg accctgctct tccaggagtc tggccacaag aaggggagct 1321 ttctggaggg cagtgaggtc cgaacgatcg tcattaacta cgccaagaaa aatgacctgg 1381 ttgatgcaga caacaaaaat cttgtgagat tggatcccat cctatgtgac tgcatcttag 1441 agaaaaatga acagcataca gtcatgaagc ttccatggga cagtcttctg accaggtgtt 1501 tggaaaaatt acagcctgcc tatcaagtga cccttcccgg acaagagccc attgtgaaga 1561 aagggagaat ctgtccaatt gacatcaccc tagcacaaag agcgtctaat aaaaaggtga 1621 ccgtggtccg gaacttggag gcctatggtc tggacccata ctcagtggct gccatccttc 1681 agcagcgatg ccaggctagc accaccgtca atcctgcccc tggggccaag gacagccttc 1741 aggtgcagat ccagggaaac caggtccacc acctcggctg gctattgctt gaagagtatc 1801 agctccctcg aaaacacatc caaggtctag aaaaggccct caaacctggc aagaagaagt 1861 gacagactct tttgtctcac gtggtggatc cggtggaaat ccaagctctg ggctggtaat 1921 ttttatgagc attttcagct tttgcaaata caaaatataa ttctttacaa aaataaattt 1981 ttattctaat ctaaaaaaaa aaaaaaaaaa aa //