LOCUS BC001161 1539 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 174, mRNA (cDNA clone MGC:1578
IMAGE:3533665), complete cds.
ACCESSION BC001161
VERSION BC001161.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1539)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1539)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 8 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4508006.
FEATURES Location/Qualifiers
source 1..1539
/db_xref="H-InvDB:HIT000030184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1578 IMAGE:3533665"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1539
/gene="ZNF174"
/gene_synonym="ZSCAN8"
/db_xref="GeneID:7727"
/db_xref="HGNC:HGNC:12963"
/db_xref="MIM:603900"
CDS 762..1466
/gene="ZNF174"
/gene_synonym="ZSCAN8"
/codon_start=1
/product="zinc finger protein 174"
/protein_id="AAH01161.1"
/db_xref="GeneID:7727"
/db_xref="HGNC:HGNC:12963"
/db_xref="MIM:603900"
/translation="MAAKMEITLSSNTEASSKQERHIIAKLEEKRGPPLQKNCPDPEL
CRQSFRRFCYQEVSGPQEALSQLRQLCRQWLQPELHTKEQILELLVMEQFLTILPPEI
QARVRHRCPMSSKEIVTLVEDFHRASKKPKQWVAVCMQGQKVLLEKTGSQLGEQELPD
FQPQTPRRDLRESSPAEPSQAGAYDRLSPHHWEKSPLLQEPTPKLAGTELLIEKTDPN
MATDELPCKLWLSFIA"
BASE COUNT 372 a 425 c 409 g 333 t
ORIGIN
1 gtccctcggt cttgggttcc cggagaggtg agtcggctgc aggtgggtgc ggggcgccgg
61 gctgttcggg gtaccggtgt cgcagtcgcc agtccgagct cacaccgggc gtggagttca
121 gctgcgcatc gggttgcggc agcttcgcca ggcctggggc tggctgggcc gcggggccgc
181 cctggaggcc ggagccactg ggcctgcggc gcctcggcag cgagcagccg ctttgctcgc
241 gtgcaggagg ctgttcgcta cctcacaccc ccggctggcg ctgtggcctc gcttagctct
301 accgtttagc acccggcgac atgcacccgg tcggtttccg ccaggatgcg ggagagttgg
361 ggcaagctac ctgcgacagc ttgaactttt cctagggatt ccgctccacc cgccggttag
421 agcgtattgc tcattaaatc cgagacctgt gtgcttgcta ctgaaataaa agaagtattt
481 tttccccaga gtccttttag gacgttatga cttttctcct ttgcaagact gcaaaaaact
541 gacaagaaga caaaactctt cccactccca gggaccgctt tgtcttgagt ttggctagta
601 aaggctagca agtgaggctt tgtctctgca tcccgttccc cctaacatcc tcagagaacc
661 ttcgtttcta gaatctttct agtattcaga gacttctcca gggtcatgat cccaaaggct
721 taacccgttt acaaggagag agttgtctcc tgacgcccaa aatggcagct aaaatggaga
781 taactttaag ctccaacact gaagcttcct ccaagcaaga gagacacata atagccaaac
841 tagaagagaa acggggccct cctctgcaaa aaaactgccc agatcctgag ctctgccgcc
901 agagcttcag acgcttttgt tatcaagagg tgtctggacc ccaagaggcg ctctcccagc
961 tccgacagct ctgccgtcag tggttgcaac ccgagctgca caccaaggag cagattttgg
1021 agcttctggt gatggagcag ttcctgacca tcctgccccc ggagatccag gctcgggtca
1081 ggcatcgatg tccaatgagc agcaaggaga ttgtgaccct cgtggaagat tttcacagag
1141 catccaagaa accaaagcag tgggtggccg tttgtatgca ggggcaaaag gtgctcttgg
1201 agaaaactgg atctcagctt ggagaacagg aactgccaga ctttcaaccg cagactccta
1261 ggagagatct cagggagagc tctccagcag agccttccca ggcaggagct tatgaccggc
1321 tgagccccca tcattgggag aaatccccac tcctccaaga accaaccccc aaattggctg
1381 ggacagaact tcttatagaa aagacagatc caaatatggc cacagatgaa cttccatgca
1441 agctatggct gagtttcatt gcttaaaatg ctcctctgtt tagaggggcc tggtagaaat
1501 aaaaacccac cctatatctt aaaaaaaaaa aaaaaaaaa
//