LOCUS BC000731 856 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens synaptogyrin 1, mRNA (cDNA clone MGC:1939 IMAGE:3508457), complete cds. ACCESSION BC000731 VERSION BC000731.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 856) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 856) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 8, 2003 this sequence version replaced BC000731.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: d Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39777617. FEATURES Location/Qualifiers source 1..856 /db_xref="H-InvDB:HIT000029876" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1939 IMAGE:3508457" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..856 /gene="SYNGR1" /gene_synonym="MGC:1939" /db_xref="GeneID:9145" /db_xref="HGNC:HGNC:11498" /db_xref="MIM:603925" CDS 27..602 /gene="SYNGR1" /gene_synonym="MGC:1939" /codon_start=1 /product="synaptogyrin 1" /protein_id="AAH00731.1" /db_xref="GeneID:9145" /db_xref="HGNC:HGNC:11498" /db_xref="MIM:603925" /translation="MEGGAYGAGKAGGAFDPYTLVRQPHTILRVVSWLFSIVVFGSIV NEGYLNSASEGEEFCIYNRNPNACSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRK KAVLSDIGVSAFWAFLWFVGFCYLANQWQVSKPKDNPLNEGTDAARAAIAFSFFSIFT WSLTAALAVRRFKDLSFQEEYSTLFPASAQP" BASE COUNT 184 a 268 c 236 g 168 t ORIGIN 1 gggggcaccg cgcgggtgca gccacgatgg aagggggtgc gtacggagcg ggcaaagccg 61 ggggcgcctt cgacccctac accctggtcc ggcagccgca caccatcctg cgcgtcgtgt 121 cttggctgtt ctccatagtg gtgttcggct ccatcgtgaa cgagggctac ctcaacagcg 181 cctccgaggg ggaggagttc tgcatctaca accgcaaccc caacgcctgc agctatggcg 241 tggccgtggg cgtgctcgcc ttcctcacct gcctgctgta cctggccctg gacgtgtact 301 tcccgcagat cagcagcgtc aaggaccgca agaaagccgt cctgtccgac atcggtgtct 361 cggccttctg ggctttcctc tggttcgtgg gattctgcta cctggccaac cagtggcagg 421 tctccaagcc caaggacaac ccactgaacg aagggacgga cgcagcccgg gccgccatcg 481 ccttctcctt tttctccatc ttcacctgga gcctgaccgc agccctggcc gtgcggagat 541 tcaaggacct aagcttccag gaggagtaca gcacactgtt ccctgcctcg gcacagccgt 601 aggcctcccc ggcttgcaga ggccggcagc cctgtatcac ccctggcagt gaggtggcag 661 gagcagccta gtgccagaaa tgtccaagat gccagggcat gcagggcagt ggaaggctgg 721 cttgaggaac caattcaggt tctccactga ctcattcatt ccttcaccgc ctccttcatt 781 gattcttcat gcgttcattc attcagtaaa catttattga gcaaaaaaaa aaaaaaaaaa 841 aaaaaaaaaa aaaaaa //