LOCUS BC000685 889 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens zinc finger, CCHC domain containing 17, mRNA (cDNA
clone IMAGE:3347946), partial cds.
ACCESSION BC000685
VERSION BC000685.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 889)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 889)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000685.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: l Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361575.
FEATURES Location/Qualifiers
source 1..889
/db_xref="H-InvDB:HIT000085861"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3347946"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>889
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
/db_xref="IMGT/GENE-DB:30246"
/db_xref="MIM:30246"
CDS 188..>889
/gene="ZCCHC17"
/gene_synonym="HSPC251"
/gene_synonym="pNO40"
/gene_synonym="PS1D"
/gene_synonym="RP11-266K22.1"
/codon_start=1
/product="ZCCHC17 protein"
/protein_id="AAH00685.1"
/db_xref="GeneID:51538"
/db_xref="HGNC:HGNC:30246"
/db_xref="IMGT/GENE-DB:30246"
/db_xref="MIM:30246"
/translation="MNSGRPETMENLPALYTIFQGEVAMVTDYGAFIKIPGCRKQGLV
HRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVSLSMKVVNQGTGKDLDPNN
VIIEQEERRRRSFQDYTGQKITLEAVLNTTCKKCGCKGHFAKDCFMQPGGTKYSLIPD
EEEEKEEAKSAEFEKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGKRARH
TSKDSKAAKKKKKKKK"
BASE COUNT 292 a 168 c 251 g 178 t
ORIGIN
1 acgaggaaga acggggtggg tggctgcctg agtctggagg cgacgcctcg gttgtgcagt
61 ctgaacctgc ccttctcagc tgagggtgct gacagcaagg ggtgggaggc gggccccgag
121 tccccagctg tggacacttg tattagcttt aatagaagag aaatggagga gccatagaat
181 attaaggatg aattcaggaa ggcctgagac catggaaaac ttgcctgctc tctacactat
241 tttccaagga gaggttgcta tggtgacaga ctatggggcc tttatcaaaa tcccaggctg
301 tcggaagcaa ggtctggtcc atcgaactca tatgtcatcc tgtcgggtgg ataagccctc
361 tgagatagta gatgttggag ataaagtgtg ggtgaagctt attggccgag agatgaaaaa
421 tgatagaata aaagtatccc tctccatgaa ggttgtcaat caagggactg ggaaagacct
481 tgatcccaac aatgttatca ttgagcaaga agagaggcgg aggcgatcct tccaggatta
541 cactgggcag aagatcaccc ttgaggctgt cttgaacact acctgcaaga agtgtggctg
601 taaaggccac tttgcaaaag attgtttcat gcaaccaggt gggactaaat actctctgat
661 acctgatgag gaagaggaaa aggaagaggc aaagtcagca gagtttgaga agcctgaccc
721 tacaaggaat ccttctagaa aaagaaagaa ggagaagaag aaaaagaaac atagagatag
781 gaagtcatct gactctgaca gctcagactc tgagagtgat acaggcaaga gggcaaggca
841 cacatcaaaa gacagcaagg cagcaaagaa gaaaaaaaaa aaaaaaaaa
//