LOCUS BC000553 1670 bp mRNA linear HUM 13-SEP-2006
DEFINITION Homo sapiens phospholipase D family, member 3, mRNA (cDNA clone
IMAGE:3163199), partial cds.
ACCESSION BC000553
VERSION BC000553.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1670)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1670)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: e Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7110640.
FEATURES Location/Qualifiers
source 1..1670
/db_xref="H-InvDB:HIT000029729"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3163199"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1670
/gene="PLD3"
/gene_synonym="HU-K4"
/db_xref="GeneID:23646"
/db_xref="HGNC:HGNC:17158"
CDS <1..1341
/gene="PLD3"
/gene_synonym="HU-K4"
/codon_start=1
/product="PLD3 protein"
/protein_id="AAH00553.2"
/db_xref="GeneID:23646"
/db_xref="HGNC:HGNC:17158"
/translation="LAVVGFGALMTQLFLWEYGDLHLFGPNQRPAPCYDPCEAVLVES
IPEGLDFPNASTGNPSTSQAWLGLLAGAHSSLDIASFYWTLTNNDTHTQEPSAQQGEE
VLRQLQTLAPKGVNVRIAVSKPSGPQPQADLQALLQSGAQVRMVDMQKLTHGVLHTKF
WVVDQTHFYLGSANMDWRSLTQVKELGVVMYNCSCLARDLTKIFEAYWFLGQAGSSIP
STWPRFYDTRYNQETPMEICLNGTPALAYLASAPPPLCPSGRTPDLKALLNVVDNARS
FIYVAVMNYLPTLEFSHPHRFWPAIDDGLRRATYERGVKVRLLISCWGHSEPSMRAFL
LSLAALRDNHTHSDIQVKLFVVPADEAQARIPYARVNHNKYMVTERATYIGTSNWSGN
YFTETAGTSLLVTQNGRGGLRSQLEAIFLRDWDSPYSHDLDTSADSVGNACRLL"
BASE COUNT 324 a 573 c 465 g 308 t
ORIGIN
1 ctggcggttg tgggcttcgg agccctgatg actcagctgt ttctatggga atacggcgac
61 ttgcatctct ttgggcccaa ccagcgccca gccccctgct atgacccttg cgaagcagtg
121 ctggtggaaa gcattcctga gggcctggac ttccccaatg cctccacggg gaacccttcc
181 accagccagg cctggctggg cctgctcgcc ggtgcgcaca gcagcctgga catcgcctcc
241 ttctactgga ccctcaccaa caatgacacc cacacgcagg agccctctgc ccagcagggt
301 gaggaggtcc tccggcagct gcagaccctg gcaccaaagg gcgtgaacgt ccgcatcgct
361 gtgagcaagc ccagcgggcc ccagccacag gcggacctgc aggctctgct gcagagcggt
421 gcccaggtcc gcatggtgga catgcagaag ctgacccatg gcgtcctgca taccaagttc
481 tgggtggtgg accagaccca cttctacctg ggcagtgcca acatggactg gcgttcactg
541 acccaggtca aggagctggg cgtggtcatg tacaactgca gctgcctggc tcgagacctg
601 accaagatct ttgaggccta ctggttcctg ggccaggcag gcagctccat cccatcaact
661 tggccccggt tctatgacac ccgctacaac caagagacac caatggagat ctgcctcaat
721 ggaacccctg ctctggccta cctggcgagt gcgcccccac ccctgtgtcc aagtggccgc
781 actccagacc tgaaggctct actcaacgtg gtggacaatg cccggagttt catctacgtc
841 gctgtcatga actacctgcc cactctggag ttctcccacc ctcacaggtt ctggcctgcc
901 attgacgatg ggctgcggcg ggccacctac gagcgtggcg tcaaggtgcg cctgctcatc
961 agctgctggg gacactcgga gccatccatg cgggccttcc tgctctctct ggctgccctg
1021 cgtgacaacc atacccactc tgacatccag gtgaaactct ttgtggtccc cgcggatgag
1081 gcccaggctc gaatcccata tgcccgtgtc aaccacaaca agtacatggt gactgaacgc
1141 gccacctaca tcggaacctc caactggtct ggcaactact tcacggagac ggcgggcacc
1201 tcgctgctgg tgacgcagaa tgggaggggc ggcctgcgga gccagctgga ggccattttc
1261 ctgagggact gggactcccc ttacagccat gaccttgaca cctcagctga cagcgtgggc
1321 aacgcctgcc gcctgctctg aggcccgatc cagtgggcag gccaaggcct gctgggcccc
1381 cgcggaccca ggtgctctgg gtcacggtcc ctgtccccgc gcccccgctt ctgtctgccc
1441 cattgtggct cctcaggctc tctcccctgc tctcccacct ctacctccac ccccaccggc
1501 ctgacgctgt ggccccggga cccagcagag ctgggggagg gatcagcccc caaagaaatg
1561 ggggtgcatg ctgggcctgg ccccctggcc cacccccact ttccagggca aaaagggccc
1621 agggttataa taagtaaata acttgtctgt aaaaaaaaaa aaaaaaaaaa
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