LOCUS BC000224 1830 bp mRNA linear HUM 03-NOV-2008 DEFINITION Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone IMAGE:3351504), partial cds. ACCESSION BC000224 VERSION BC000224.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1830) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1830) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: a Column: 11. FEATURES Location/Qualifiers source 1..1830 /db_xref="H-InvDB:HIT000085810" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3351504" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1830 /gene="SUMF2" /gene_synonym="pFGE" /db_xref="GeneID:25870" /db_xref="HGNC:HGNC:20415" /db_xref="MIM:607940" CDS <1..729 /gene="SUMF2" /gene_synonym="pFGE" /codon_start=1 /product="SUMF2 protein" /protein_id="AAH00224.1" /db_xref="GeneID:25870" /db_xref="HGNC:HGNC:20415" /db_xref="MIM:607940" /translation="AAAPAVAPGRRVAQARDFVREKKYRTEAEMFGWSFVFEDFVSDE LRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAF PAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGN TPDSASDNLGFRCAADAGRPPGEL" BASE COUNT 444 a 467 c 479 g 440 t ORIGIN 1 gctgctgccc ctgctgtcgc tcctggtcgg cgcgtggctc aagctaggga ttttgtcagg 61 gagaaaaagt atcggacaga agctgagatg tttggatgga gctttgtctt tgaggacttt 121 gtctctgatg agctgagaaa caaagccacc cagccaatga agtctgtact ctggtggctt 181 ccagtggaaa aggcattttg gaggcagcct gcaggtcctg gctctggcat ccgagagaga 241 ctggagcacc cagtgttaca cgtgagctgg aatgacgccc gtgcctactg tgcttggcgg 301 ggaaaacgac tgcccacgga ggaagagtgg gagtttgccg cccgaggggg cttgaagggt 361 caagtttacc catgggggaa ctggttccag ccaaaccgca ccaacctgtg gcagggaaag 421 ttccccaagg gagacaaagc tgaggatggc ttccatggag tctccccagt gaatgctttc 481 cccgcccaga acaactacgg gctctatgac ctcctgggga acgtgtggga gtggacagca 541 tcaccgtacc aggctgctga gcaggacatg cgcgtcctcc ggggggcatc ctggatcgac 601 acagctgatg gctctgccaa tcaccgggcc cgggtcacca ccaggatggg caacactcca 661 gattcagcct cagacaacct cggtttccgc tgtgctgcag acgcaggccg gccgccaggg 721 gagctgtaag cagccgggtg gtgacaagga gaaaagcctt ctagggtcac tgtcattccc 781 tggccatgtt gcaaacagcg caattccaag ctcgagagct tcagcctcag gaaagaactt 841 ccccttccct gtctcccatc cctctgtggc aggcgcctct caccagggca ggagaggact 901 cagcctcctg tgttttggag aaggggccca atgtgtgttg acgatggctg ggggccaggt 961 gtttctgtta gaggccaagt attattgaca caggattgca aacacacaaa caattggaac 1021 agagcactct gaaaggccat tttttaagca ttttaaaatc tattctctcc ccctttctcc 1081 ctggatgatt caggaagctg acattgtttc ctcaaggcag aattttcctg gttctgtttt 1141 ctcagccagt tgctgtggaa ggagaatgct ttctttgtgg cctcatctgt ggtttcgtgt 1201 ccctctgaag gaaactagtt tctactgtgt aacaggcaga catgtaacta tttaaagcac 1261 agttcagtcc taaaagggtc tgggagaacc agatgatgta ctaggtgaag cattgcattg 1321 tgggaatcac aaagcaaata gtactccaga aagacaaata tcagaagctt cctattcttt 1381 tttttttttt tttttttttt gagacagggt ctttctctgt tgcccaggct agagtgcact 1441 ggtgatcacg gctcactcta gccttgaatt cctgggccca agcaattctc ccacctcagc 1501 ctcctgagta gctgggacta caagtgtgca ccaccatgcc tggctaattt tttgaatttt 1561 tgtagtgatg ggatctcgct ctgttgccca gggtggtctc gaactcctgg cctcaagcga 1621 tcctcccacc tcgacctccc aaagtgctgg gattacaggt gtgagccacc tcgcctgggc 1681 ccccttctcc atatgcctcc aaaaacatgt ccctggagag tagcctgctc ccacactgtc 1741 actggatgtc atggggccaa taaaatctcc tgcaattgtg tatctcaaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //