LOCUS BC000158 1397 bp mRNA linear HUM 06-JUN-2006
DEFINITION Homo sapiens family with sequence similarity 108, member A1, mRNA
(cDNA clone MGC:5244 IMAGE:2985707), complete cds.
ACCESSION BC000158
VERSION BC000158.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1397)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1397)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 23, 2001 this sequence version replaced BC000158.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: b Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361948.
FEATURES Location/Qualifiers
source 1..1397
/db_xref="H-InvDB:HIT000029393"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5244 IMAGE:2985707"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1397
/gene="FAM108A1"
/gene_synonym="MGC5244"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
CDS 145..855
/gene="FAM108A1"
/gene_synonym="MGC5244"
/codon_start=1
/product="FAM108A1 protein"
/protein_id="AAH00158.1"
/db_xref="GeneID:81926"
/db_xref="HGNC:HGNC:28756"
/translation="MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPG
PGGAGAAPLGTLRASSGAPGRWKLHLTERADFQYSQRELDTIEVFPTKSARGNHVSCM
YVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHCNIFSYDYSGYGASSGRPSER
NLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVLHSPLTSGM
RVAFPDTKKTYCFDAFPK"
BASE COUNT 230 a 510 c 443 g 214 t
ORIGIN
1 ggctgctgtc tggggcggta gctggggggg cgctctcccc cctgcccgcg actcggagca
61 cccccacccc tcccctgccg ggccaggccg ggcggcgttg ttggcggggg ccccggtgga
121 ggcccggcct gggcggcgcc cgccatgaat gggctgtcgc tgagtgagct ctgctgcctc
181 ttctgctgcc cgccctgccc cggccgcatc gctgccaagc tcgccttcct gccgccggag
241 gccacctact ccctggtgcc tgagcccgag ccggggcctg gtggggccgg ggccgccccc
301 ttggggaccc tgagagcctc ctcgggcgca cccgggcgct ggaagctgca cctgacggag
361 cgtgccgact tccagtacag ccagcgcgag ctggacacca tcgaggtctt ccccaccaag
421 agcgcccgcg gcaaccacgt ctcctgcatg tatgttcgct gcgtgcctgg tgccaggtac
481 acggtcctct tctcgcacgg caatgccgtg gacctgggcc agatgagcag cttctacatt
541 ggcctgggct cccgcctcca ctgcaacatc ttctcctacg actactccgg ctacggtgcc
601 agctcgggca ggccttccga gaggaacctc tatgccgaca tcgacgccgc ctggcaggcc
661 ctgcgcacca ggtacggcat cagcccggac agcatcatcc tgtacgggca gagcatcggc
721 acggtgccca ccgtggacct ggcctcgcgc tacgagtgtg ccgcggtggt gctgcactcg
781 ccgctcacct cgggcatgcg cgtcgccttc cccgacacca agaagaccta ctgcttcgac
841 gccttcccta agtgagcggc ccgggcgggg acgggggcgg ggcggggccc gggccgggcg
901 cgaagtctca ccggctccac gaccctcccg cagcatcgag aaggtgtcca agatcacgtc
961 tcccgtgctc atcatccacg gcacggagga cgaggtgatc gacttctcgc acgggctggc
1021 gctctacgag cgctgcccca aggcggtgga gccgctgtgg gtggagggcg ccgggcacaa
1081 cgacatcgag ctctacagcc agtacctgga gcgcctgcgt cgcttcatct cccaggagct
1141 gcccagccag cgcgcctagc ggcggcccca accggccgga cctcagcaat aaggcggccc
1201 ccggacctca ccccgcgccg gcccccaccc aggggctgca tgtggacccc ccgggcggcc
1261 caggggaccc cgccccgacc caggggctgt ggacgatgta caggcaacag agctacgcac
1321 tcctttcctt ttggaagcaa gaagaaaata cgtgaaaacg gaaattaaag atttaaaatt
1381 ttaaaaaaaa aaaaaaa
//