LOCUS AY303781 575 bp mRNA linear ROD 25-JUL-2016 DEFINITION Mus musculus strain AKR/J MHC class II antigen E alpha (H2-Ea) mRNA, partial cds. ACCESSION AY303781 VERSION AY303781.1 KEYWORDS . SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 575) AUTHORS Cao,T.M., Lo,B., Ranheim,E.A., Grumet,F.C. and Shizuru,J.A. TITLE Variable hematopoietic graft rejection and graft-versus-host disease in MHC-matched strains of mice JOURNAL Proc. Natl. Acad. Sci. U.S.A. 100 (20), 11571-11576 (2003) PUBMED 14504392 REFERENCE 2 (bases 1 to 575) AUTHORS Cao,T.M., Lo,B., Ranheim,E.A., Grumet,F.C. and Shizuru,J.A. TITLE Direct Submission JOURNAL Submitted (20-MAY-2003) Division of Blood and Bone Marrow Transplantation, Stanford University, 300 Pasteur Drive, H3249, MC:5623, Stanford, CA 94305-5623, USA FEATURES Location/Qualifiers source 1..575 /organism="Mus musculus" /mol_type="mRNA" /strain="AKR/J" /db_xref="taxon:10090" /chromosome="17" /haplotype="k" /cell_type="splenocytes" gene <1..>575 /gene="H2-Ea" CDS <1..>575 /gene="H2-Ea" /codon_start=2 /product="MHC class II antigen E alpha" /protein_id="AAP69828.1" /translation="KRNTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLE EFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNI LICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYD CEVDHWGLEEPLRKHWEFEEKTLLPETKENV" misc_feature 5..247 /gene="H2-Ea" /note="Region: alpha-1 domain" misc_feature 248..529 /gene="H2-Ea" /note="Region: alpha-2 domain" BASE COUNT 151 a 144 c 144 g 136 t ORIGIN 1 aaagaggaac accatcatcc aggcggagtt ctatctttta ccagacaaac gtggagagtt 61 tatgtttgac tttgacggcg atgagatttt ccatgtagac attgaaaagt cagagaccat 121 ctggagactt gaagaatttg caaagtttgc cagctttgag gctcagggtg cactggctaa 181 tatagctgtg gacaaagcta acctggatgt catgaaagag cgttccaaca acactccaga 241 tgccaacgtg gccccagagg tgactgtact ctccagaagc cctgtgaacc tgggagagcc 301 caacatcctc atctgtttca ttgacaagtt ctcccctcca gtggtcaatg tcacctggct 361 ccggaatgga cggcctgtca ccgaaggcgt gtcagagaca gtgtttctcc cgagggacga 421 tcacctcttc cgcaaattcc actatctgac cttcctgccc tccacagatg atttctatga 481 ctgtgaggtg gatcactggg gcttggagga gcctctgcgg aagcactggg agtttgaaga 541 gaaaaccctc ctcccagaaa ctaaagagaa tgtcg //