LOCUS AL354615 3840 bp mRNA linear HUM 15-OCT-2008
DEFINITION Novel human gene mapping to chomosome 1.
ACCESSION AL354615
VERSION AL354615.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3840)
AUTHORS Rhodes S., Huckle E.
JOURNAL Submitted (27-APR-2000) to the INSDC. E-mail contact:
humquery@sanger.ac.uk
COMMENT This cDNA sequence was assembled from public domain ESTs and single
pass sequencing reads from expressed DNA templates, aligned to the
genomic DNA sequence from the bacterial clone 37C10 (AL049569).
The EST sequences listed match this sequence with an identity
of at least 95% between the coordinates shown.
Further information can be found at
http://www.sanger.ac.uk/HGP/Chr1/
Experimentally determined gene
Sanger Centre name : dJ37C10.C1.3
FEATURES Location/Qualifiers
source 1..3840
/db_xref="H-InvDB:HIT000250333"
/organism="Homo sapiens"
/chromosome="1"
/map="1p36"
/mol_type="mRNA"
/db_xref="taxon:9606"
exon 1..44
/number=1
CDS 35..3577
/product="hypothetical protein"
/db_xref="GOA:Q9NQ11"
/db_xref="H-InvDB:HIT000250333.13"
/db_xref="HGNC:HGNC:30213"
/db_xref="InterPro:IPR001757"
/db_xref="InterPro:IPR006544"
/db_xref="InterPro:IPR008250"
/db_xref="InterPro:IPR018303"
/db_xref="InterPro:IPR023214"
/db_xref="InterPro:IPR023298"
/db_xref="InterPro:IPR023299"
/db_xref="InterPro:IPR036412"
/db_xref="UniProtKB/Swiss-Prot:Q9NQ11"
/protein_id="CAB89728.1"
/translation="MSADSSPLVGSTPTGYGTLTIGTSIDPLSSSVSSVRLSGYCGSP
WRVIGYHVVVWMMAGIPLLLFRWKPLWGVRLRLRPCNLAHAETLVIEIRDKEDSSWQL
FTVQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGAVPEGAWKDTAQLHKSEEAVSVGQK
RVLRYYLFQGQRYIWIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGP
NVISIPVKSYPQLLVDEALNPYYGFQAFSIALWLADHYYWYALCIFLISSISICLSLY
KTRKQSQTLRDMVKLSMRVCVCRPGGEEEWVDSSELVPGDCLVLPQEGGLMPCDAALV
AGECMVNESSLTGESIPVLKTALPEGLGPYCAETHRRHTLFCGTLILQARAYVGPHVL
AVVTRTGFCTAKGGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRN
RVPLNEIVIRALDLVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQ
LVCFDKTGTLTEDGLDVMGVVPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQD
TPVGDPMDLKMVESTGWVLEEEPAADSAFGTQVLAVMRPPLWEPQLQAMEEPPVPVSV
LHRFPFSSALQRMSVVVAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTA
AGYRVVALASKPLPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLKPQTTPVIQALR
RTRIRAVMVTGDNLQTAVTVARGCGMVAPQEHLIIVHATHPERGQPASLEFLPMESPT
AVNGVKDPDQAASYTVEPDPRSRHLALSGPTFGIIVKHFPKLLPKVLVQGTVFARMAP
EQKTELVCELQKLQYCVGMCGDGANDCGALKAADVGISLSQAEASVVSPFTSSMASIE
CVPMVIREGRCSLDTSFSVFKYMALYSLTQFISVLILYTINTNLGDLQFLAIDLVITT
TVAVLMSRTGPALVLGRVRPPGALLSVPVLSSLLLQMVLVTGVQLGGYFLTLAQPWFV
PLNRTVAAPDNLPNYENTVVFSLSSFQYLILAAAVSKGAPFRRPLYTNVPFLVALALL
SSVLVGLVLVPGLLQGPLALRNITDTGFKLLLLGLVTLNFVGAFMLESVLDQCLPACL
RRLRPKRASKKRFKQLERELAEQPWPPLPAGPLR"
exon 45..139
/number=2
exon 140..322
/number=3
misc_feature complement(join(321..366,365..381))
/note="matches EST AA601386 from clone IMAGE:1100856"
exon 323..381
/number=4
exon 382..511
/number=5
exon 512..591
/number=6
misc_feature 521..591
/note="matches EST AA367383"
misc_feature 582..957
/note="matches EST AW503046 from clone IMAGE:3073988"
misc_feature 582..1055
/note="matches EST AW503042 from clone IMAGE:3073970"
exon 592..669
/number=7
exon 670..739
/number=8
exon 740..874
/number=9
exon 875..941
/number=10
exon 942..1073
/number=11
misc_feature 1072..1235
/note="matches EST AA326792"
exon 1074..1229
/number=12
misc_feature 1159..1416
/note="matches EST T19151 from clone a10004"
exon 1230..1340
/number=13
exon 1341..1387
/number=14
exon 1388..1576
/number=15
misc_feature 1528..1913
/note="matches EST AW247062 from clone IMAGE:2822594"
exon 1577..1783
/number=16
misc_feature 1767..1975
/note="matches EST T09153 from clone HIBBP79"
exon 1784..1879
/number=17
exon 1880..2039
/number=18
exon 2040..2160
/number=19
exon 2161..2285
/number=20
exon 2286..2446
/number=21
misc_feature join(2287..2459,2561..2956)
/note="matches EST AW163138 from clone IMAGE:2783726"
exon 2447..2563
/number=22
exon 2564..2643
/number=23
misc_feature 2643..2886
/note="matches EST AA359097"
exon 2644..2796
/number=24
exon 2797..2893
/number=25
exon 2894..3117
/number=26
exon 3118..3269
/number=27
misc_feature complement(join(3179..3208,3231..3834))
/note="matches EST AI694453 from clone IMAGE:2338239"
exon 3270..3439
/number=28
misc_feature complement(join(3393..3472,3558..3805,3806..3840))
/note="matches EST AA977749 from clone IMAGE:1589627"
misc_feature join(3421..3488,3493..3702)
/note="matches EST H20364 from clone IMAGE:172875"
exon 3440..3840
/number=29
misc_feature complement(3476..3840)
/note="matches EST AI015711 from clone IMAGE:1636139"
misc_feature complement(join(3508..3644,3636..3824))
/note="matches EST AI560050 from clone IMAGE:2211121"
misc_feature complement(3540..3840)
/note="matches EST AI061266 from clone IMAGE:1699709"
misc_feature complement(3558..3840)
/note="matches EST AI380589 from clone IMAGE:2107078"
misc_feature complement(3559..3840)
/note="matches EST AI334403 from clone IMAGE:1933609"
misc_feature complement(3582..3840)
/note="matches EST AW081719 from clone IMAGE:2587072"
misc_feature complement(3602..3840)
/note="matches EST R58916"
misc_feature complement(3679..3840)
/note="matches EST AW591743 from clone IMAGE:2793472"
misc_feature complement(3700..3840)
/note="matches EST AI887158 from clone IMAGE:2438061"
misc_feature complement(3728..3840)
/note="matches EST AI954171 from clone IMAGE:2549985"
BASE COUNT 682 a 1277 c 1162 g 719 t
ORIGIN
1 gcgccggggc cggcgatgag cgcgaggagc cggcatgagc gcagacagca gccctctcgt
61 gggcagcacg cccaccggtt atgggaccct gacgataggg acatcaatag atcccctcag
121 ctcctcagtt tcatccgtga ggctcagcgg ctactgtggc agtccatgga gggtcatcgg
181 ctatcacgtc gtggtctgga tgatggctgg gatccctttg ctgctcttcc gttggaagcc
241 cctgtggggg gtgcggctgc ggctccggcc ctgcaacctg gcccacgccg aaacactcgt
301 tatcgaaata agagacaaag aggatagttc ctggcagctc ttcactgtcc aggtgcagac
361 tgaggccatc ggcgagggca gcctggagcc gtccccacag tcccaggcag aggatggccg
421 gagccaggcg gcagttgggg cggtaccaga gggtgcctgg aaggatacgg cccagctcca
481 caagagcgag gaggcggtga gtgtcggaca gaagcgggtg ctgcggtatt acctcttcca
541 gggccagcgc tatatctgga tcgagaccca gcaagccttc taccaggtca gcctcctgga
601 ccatggccgc tcttgtgacg acgtccaccg ctcccgccat ggcctcagcc tccaggacca
661 aatggtgagg aaggccattt acggccccaa cgtgatcagc ataccggtca agtcctaccc
721 ccagctgctg gtggacgagg cactgaaccc ctactatggg ttccaggcct tcagcatcgc
781 gctgtggctg gctgaccact actactggta cgccctgtgc atcttcctca tttcctccat
841 ctccatctgc ctgtcgctgt acaagaccag aaagcaaagc cagactctaa gggacatggt
901 caagttgtcc atgcgggtgt gcgtgtgccg gccaggggga gaggaagagt gggtggactc
961 cagtgagcta gtgcccggag actgcctggt gctgccccag gagggtgggc tgatgccctg
1021 tgatgccgcc ctggtggccg gcgagtgcat ggtgaatgag agctctctga caggagagag
1081 cattccagtg ctgaagacgg cactgccgga ggggctgggg ccctactgtg cagagacaca
1141 ccggcggcac acactcttct gcgggaccct catcttgcag gcccgggcct atgtgggacc
1201 gcacgtcctg gcagtggtga cccgcacagg gttctgcacg gcaaaagggg gcctggtgag
1261 ctccatcttg cacccccggc ccatcaactt caagttctat aaacacagca tgaagtttgt
1321 ggctgccctc tctgtcctgg ctctcctcgg caccatctac agcatcttca tcctctaccg
1381 aaaccgggtg cctctgaatg agattgtaat ccgggctctc gacctggtga ccgtggtggt
1441 gccacctgcc ctgcctgctg ccatgactgt gtgcacgctc tacgcccaga gccgactgcg
1501 gagacagggc attttctgca tccacccact gcgcatcaac ctggggggca agctgcagct
1561 ggtgtgtttc gacaagacgg gcaccctcac tgaggacggc ttagacgtga tgggggtggt
1621 gcccctgaag gggcaggcat tcctgcccct ggtcccagag cctcgccgcc tgcctgtggg
1681 gcccctgctc cgagcactgg ccacctgcca tgccctcagc cggctccagg acacccccgt
1741 gggcgacccc atggacttga agatggtgga gtctactggc tgggtcctgg aggaagagcc
1801 ggctgcagac tcagcatttg ggacccaggt cttggcagtg atgagacccc cactttggga
1861 gccccagctg caggcaatgg aggagccccc ggtgccagtc agcgtcctcc accgcttccc
1921 cttctcttcg gctctgcagc gcatgagtgt ggtggtggcg tggccagggg ccactcagcc
1981 cgaggcctac gtcaaaggct ccccggagct ggtggcaggg ctctgcaacc ccgagacagt
2041 gcccaccgac ttcgcccaga tgctgcagag ctatacagct gctggctacc gtgtcgtggc
2101 cctggccagc aagccactgc ccactgtgcc cagcctggag gcagcccagc aactgacgag
2161 ggacactgtg gaaggagacc tgagcctcct ggggctgctg gtcatgagga acctactgaa
2221 gccgcagaca acgccagtta tccaggctct gcgaaggacc cgcatccgcg ccgtcatggt
2281 gacaggggac aacctgcaga cagcggtgac tgtggcccgg ggctgtggca tggtggcccc
2341 ccaggagcat ctgatcatcg tccacgccac ccaccctgag cggggtcagc ctgcctctct
2401 cgagttcctg ccgatggagt cccccacagc cgtgaatggc gttaaggatc ctgaccaggc
2461 tgcaagctac accgtggagc cagacccccg atccaggcac ctggccctca gcgggcccac
2521 ctttggtatc attgtgaagc acttccccaa gctgctgccc aaggtcctgg tccagggcac
2581 tgtctttgcc cgcatggccc ctgagcagaa gacagagctg gtgtgcgagc tacagaagct
2641 tcagtactgc gtgggcatgt gcggagacgg cgccaatgac tgtggggccc tgaaggcggc
2701 tgatgtcggc atctcgctgt cccaggcaga agcctcagtg gtctcaccct tcacctcgag
2761 catggccagt attgagtgcg tgcccatggt catcagggag gggcgctgtt cccttgacac
2821 ttcgttcagc gtcttcaagt acatggctct gtacagcctg acccagttca tctccgtcct
2881 gatcctctac acgatcaaca ccaacctggg tgacctgcag ttcctggcca tcgacctggt
2941 catcaccacc acagtggcag tgctcatgag ccgcacgggg ccagcgctgg tcctgggacg
3001 ggtgcggcca ccgggggcgc tgctcagcgt gcccgtgctc agcagcctgc tgctgcagat
3061 ggtcctggtg accggcgtgc agctaggggg ctacttcctg accctggccc agccatggtt
3121 cgtgcctctg aacaggacag tggccgcacc agacaacctg cccaactacg agaacaccgt
3181 ggtcttctct ctgtccagct tccagtacct catcctggct gcagccgtgt ccaagggggc
3241 gcccttccgc cggccgctct acaccaatgt gcccttcctg gtggccctgg cgctcctgag
3301 ctccgtcctg gtgggccttg tcctggtccc cggcctcctg caggggccgc tggcgctgag
3361 gaacatcact gacaccggct tcaagctgct gctgctgggt ctggtcaccc tcaacttcgt
3421 gggggccttc atgctggaga gcgtgctaga ccagtgcctc cccgcctgcc tgcgccgcct
3481 ccggcccaag cgggcctcca agaagcgctt caagcagctg gaacgagagc tggccgagca
3541 gccctggccg ccgctgcccg ccggccccct gaggtagtgc aggcccacgg gcaccccaga
3601 cactggaact ccctgcctct gagccaccaa ctggacccct ctccagcaac accaccgcca
3661 ccacctccca catccctgag gttggcgact gtctacactc ctcccccgag accaccccca
3721 ccctggggaa gcgttgacta ctgtccccta ccttggacca tcccgcgtag gggtggcagc
3781 ccccagctcc cctcagtgct gctgtcagtg tagcaaataa agtcatgata ttttcctggc
//