LOCUS AK369124 1730 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial
cds, clone: NIASHv2085J14.
ACCESSION AK369124
VERSION AK369124.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1730
/clone="NIASHv2085J14"
/clone_lib="Normalized and subtracted barley full-length
cDNA library from seedling shoot and root with ABA
treatment"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot and root"
CDS <272..805
/codon_start=1
/note="Start codon is not identified"
/product="predicted protein"
/protein_id="BAK00326.1"
/translation="VPPNRSLRRTGTSDHNFHIESRAIARHVLRKYKPELLVGDGSPE
SAAAVDVWLEVEAHQHHPVLVAITMQCLVAPLLGNATDQDVLDENLGKLRKVLEEYEA
RLSASKYLAGQSVSLADLSHFPMMRYFMETEFAALVEEHPHVKAWWEELKARPAARRV
TEFMPPDFGLGKKAEQG"
BASE COUNT 390 a 491 c 486 g 363 t
ORIGIN
1 gacgcacccg tacgtcgatc cgcgagaagg gaatggcgcc ggcggtgaag gtgtacgggt
61 gggcgatgtc gccgttcgtg gcccgcccgc tgctgtgcct ggaggaggca ggcgtcgact
121 acgagctcgt ccccatgagc cgcgaggccg gcgaccaccg ccagccggac ttcctcgcca
181 ggaacccctt cggccaggtg ccggttctcg aggacggcga cctcactatc ttcggtaatt
241 ccgtcgccat ctcttctttg tttgtttata ggtaccccca aatcgatcgt taaggagaac
301 tggtactagt gatcacaatt ttcacataga atcgcgcgcg atcgccaggc acgtgcttcg
361 caagtacaag ccggagttgc tggtaggcga cggctcgccg gagtcggcgg ccgcggtgga
421 cgtgtggctg gaggtggagg cccaccagca ccacccggtg ttggtggcca tcacgatgca
481 gtgcctcgtc gccccgctcc tcggcaacgc gacggaccag gacgtcctcg acgagaacct
541 cgggaagctg aggaaggtgc tggaggagta cgaggcgcgg ctgtcggcgt ccaagtacct
601 cgccgggcag tccgtcagcc tcgccgacct cagccacttc ccgatgatgc gctacttcat
661 ggagaccgag ttcgcggcgc tggtagagga gcacccccat gtcaaggcgt ggtgggagga
721 gctcaaggcg aggccggcgg ccaggagggt gacggagttc atgccgcccg actttgggct
781 tggaaagaag gcagagcagg gatgactgat gacagcaaca ccggcggact ggcctgcagg
841 cgatggtgac ccacatattt tatacggtct gtgcagctat ggctcaatgt attgtttctt
901 tggaggtatg gcacaatgct tttggttgct tttgtctcgc gcatgaataa atgtagaagg
961 aataaacaga gattgatgga atttaatctt agtcacaaat atggttgaga gcaaagctaa
1021 ggcctccact gctagagcac gcatcgctca caagctggcc cgctatgtcc gcgccactcc
1081 cgtccacctc actagcctaa acggcagcgc taacccctcc acttctcatt tgactcttgg
1141 aggtgctccc aaacgcagac tcagaaacag ccaaaatacc tggtaccctg ctgacgacga
1201 gaagcctttc atcaagcgtg ctagtaagca gcctcgcgcc tcaaccggca gagcctccgt
1261 gcgccccgga tcagttgtta tccttctttc tggaaacaac agaggacgca gagttgttgt
1321 tcttaagcgc cttgcctcag gaaatcttct tgtcaccgga cctcacagcg tcaacggagt
1381 ttctttgagc agagtcaacc ccgcatatgt gctgtccact tccaccagcg tctcacttga
1441 cggagtgact gccaatgtcg atgactcctt cttcaagaga ggaaagagat tcaccaagaa
1501 cgagctcaag aatgcttcag agcacagact taaagttgct gctgagggta aggctcacga
1561 gcaaaaatgg agataagagc ttaagactgt tcaaaagtca gttgatagcg ctcttttggc
1621 caacatcaag aaggtcgatc acctcagagg ataccttgga accagattca ccctctccaa
1681 taccaccaga cctcacgaac ttaggttctg atcttcatta tttaactcgc
//