LOCUS AK355371 1182 bp mRNA linear PLN 20-MAY-2011
DEFINITION Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial
cds, clone: NIASHv1019N02.
ACCESSION AK355371
VERSION AK355371.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Hordeum vulgare subsp. vulgare (domesticated barley)
ORGANISM Hordeum vulgare subsp. vulgare
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
REFERENCE 1 (bases 1 to 1182)
AUTHORS Matsumoto,T., Kanamori,H. and Tanaka,T.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2010) to the DDBJ/EMBL/GenBank databases.
Contact:Takashi Matsumoto
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; Kannondai 2-1-2, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Matsumoto,T., Tanaka,T., Sakai,H., Amano,N., Kanamori,H.,
Kurita,K., Kikuta,A., Kamiya,K., Yamamoto,M., Ikawa,H., Fujii,N.,
Hori,K., Itoh,T. and Sato,K.
TITLE Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs
Derived from 12 Clone Libraries
JOURNAL Plant Physiol. 156, 20-28 (2011)
COMMENT This clone was obtained at our laboratory
Please visit our web site
URL: http://barleyflc.dna.affrc.go.jp/hvdb/index.html
FEATURES Location/Qualifiers
source 1..1182
/clone="NIASHv1019N02"
/clone_lib="Normalized barley full-length cDNA library
from seedling shoot in normal or dark"
/cultivar="Haruna Nijo"
/db_xref="taxon:112509"
/dev_stage="seedling"
/mol_type="mRNA"
/organism="Hordeum vulgare subsp. vulgare"
/sub_species="vulugare"
/tissue_type="shoot"
CDS <1..998
/codon_start=3
/note="Start codon is not identified"
/product="predicted protein"
/protein_id="BAJ86590.1"
/translation="RNPTAAGAVSELAELVLPWLPPPDLAVAASASRAMRAAASAVTA
RRAADSARGLEAFPAPFVNPIDSQPYSYFIYTPFSLIPSAASFHAQPWGCAWSRAPGP
TWPRPDLGLPFAGCSCARGVCGGAGCACADAEAVAADPSGAGMRSLSECGDGCACGPS
CENRRTQRGVTVRLRVERQLKKGWALHAAEAIHRGQFVCEYAGEFLTTEEARRRHRLY
DELALVGKLSPALLVIREHLPSGRVCMRVNIDATKVGNVARFINHSCDGGNLRPVLVR
SSGSLLPRLCLFAARDIVDGEELAFSYGDARPSPKGLPCFCGSLCCPGVLPAEET"
BASE COUNT 193 a 365 c 358 g 266 t
ORIGIN
1 ggagaaatcc aacggcggcc ggtgccgtca gcgagctggc ggagctggtc ctcccgtggc
61 tgccgccgcc cgaccttgcc gtcgcggctt ccgccagccg cgccatgcgc gcggccgcgt
121 ctgccgtcac tgcccgccgc gccgccgact cggcccgcgg cctggaggcc ttccctgccc
181 ccttcgtcaa ccccatcgac tcccagccct actcctactt catctacacg cccttctccc
241 tcattccttc cgcggcctcc ttccacgccc agccgtgggg ctgcgcatgg tcccgggcgc
301 cggggcccac ctggccccgc cccgacctgg gcctcccctt cgcggggtgc tcgtgcgccc
361 ggggtgtgtg cggcggcgcg gggtgcgcgt gcgccgacgc ggaggccgtg gcggcggatc
421 cgtcgggagc ggggatgcgg agcctcagcg agtgcggcga cgggtgcgcg tgcgggccct
481 cgtgcgagaa ccggcggacg cagcgcggcg tcacggtgcg gctgcgcgtc gagcgccaac
541 tgaagaaagg gtgggcgctg cacgccgccg aggccattca ccgtggccag ttcgtctgcg
601 agtatgccgg tgagttcttg acaacagaag aagcccggag gaggcatagg ctgtatgacg
661 agcttgcctt ggttggtaag ctctctcctg cactcctcgt catacgtgag catcttcctt
721 ctgggagagt atgcatgcga gttaacattg acgcgacaaa agtgggaaac gtggctcgtt
781 tcatcaacca ttcatgtgat ggaggcaacc tacgccctgt cttagtgaga agctccggtt
841 cgttgctccc aaggctctgc ctttttgctg ccagagatat agtggacggg gaagagctcg
901 ccttcagtta cggggatgct cgacccagtc ccaagggctt accatgcttc tgtggaagct
961 tgtgttgccc tggtgtatta cctgccgaag aaacctaagt ttgtgtcatc ggatgtaatt
1021 ccttgggagc aaatttgatt atgcgctgtt tgtactttac aaaaatgttg tcaagcttca
1081 ggatgagtta ttattccttc atttcatcgg ttgtaatacg ttcctaacaa attttatgta
1141 ttctttcaat atgacatcag ttgtaactgc tgacttttta ac
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