LOCUS AK313384 1769 bp mRNA linear HTC 24-MAY-2008
DEFINITION Homo sapiens cDNA, FLJ93917, highly similar to Homo sapiens
squalene epoxidase (SQLE), mRNA.
ACCESSION AK313384
VERSION AK313384.1
KEYWORDS HTC; HTC_FLI; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1769)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (11-JAN-2008) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Kaida,T., Tsuchiya,K.,
Iida,Y., Takayama,Y., Murakawa,K., Kanehori,K., Andoh,T.,
Kagawa,N., Sato,R., Kawamura,Y., Tanaka,S., Kisu,Y., Sugano,S.,
Goshima,N., Nomura,N. and Isogai,T.
TITLE NEDO functional analysis of protein and research application
project
JOURNAL Unpublished (2008)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC and Biological
Information Research Center (BIRC), AIST; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1769
/clone="TOVAR2000653"
/clone_lib="TOVAR2"
/db_xref="H-InvDB:HIT000432250"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="ovary, tumor tissue"
CDS 45..1769
/note="highly similar to Homo sapiens squalene epoxidase
(SQLE), mRNA"
/protein_id="BAG36182.1"
/translation="MWTFLGIATFTYFYKKFGDFITLANREVLLCVLVFLSLGLVLSY
RCRHRNGGLLGRQQSGSQFALFSDILSGLPFIGFFWAKSPPESENKEQLEARRRRKGT
NISETSLIGTAACTSTSSQNDPEVIIVGAGVLGSALAAVLSRDGRKVTVIERDLKEPD
RIVGEFLQPGGYHVLKDLGLGDTVEGLDAQVVNGYMIHDQESKSEVQIPYPLSENNQV
QSGRAFHHGRFIMSLRKAAMAEPNAKFIEGVVLQLLEEDDVVMGVQYKDKETGDIKEL
HAPLTVVADGLFSKFRKSLVSNKVSVSSHFVGFLMKNAPQFKANHAELILANPSPVLI
YQISSSETRVLVDIRGEMPRNLREYMVEKIYPQIPDHLKEPFLEATDNSHLRSMPASF
LPPSSVKKRGVLLLGDAYNMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEA
KKSFYWARKTSHSFVVNILAQALYELFSATDDSLHQLRKACFLYFKLGGECVAGPVGL
LSVLSPNPLVLIGHFFAVAIYAVYFCFKSEPWITKPRALLSSGAVLYKACSVIFPLIY
SEMKYMVH"
BASE COUNT 473 a 382 c 399 g 515 t
ORIGIN
1 ataatctccg ccttgaccgg tgccaccaaa gaagccttgg aaccatgtgg acttttctgg
61 gcattgccac tttcacctat ttttataaga agttcgggga cttcatcact ttggccaaca
121 gggaggtcct gttgtgcgtg ctggtgttcc tctcgctggg cctggtgctc tcctaccgct
181 gtcgccaccg aaacgggggt ctcctcgggc gccagcagag cggctcccag ttcgccctct
241 tctcggatat tctctcaggc ctgcctttca ttggcttctt ctgggccaaa tccccccctg
301 aatcagaaaa taaggagcag ctcgaggcca ggaggcgcag aaaaggaacc aatatttcag
361 aaacaagctt aataggaaca gctgcctgta catcaacatc ttctcagaat gacccagaag
421 ttatcatcgt gggagctggc gtgcttggct ctgctttggc agctgtgctt tccagagatg
481 gaagaaaggt gacagtcatt gagagagact taaaagagcc tgacagaata gttggagaat
541 tcctgcagcc gggtggttat catgttctca aagaccttgg tcttggagat acagtggaag
601 gtcttgatgc ccaggttgta aatggttaca tgattcatga tcaggaaagc aaatcagagg
661 ttcagattcc ttaccctctg tcagaaaaca atcaagtgca gagtggaaga gctttccatc
721 acggaagatt catcatgagt ctccggaaag cagctatggc agagcccaat gcaaagttta
781 ttgaaggtgt tgtgttacag ttattagagg aagatgatgt tgtgatggga gttcagtaca
841 aggataaaga gactggagat atcaaggaac tccatgctcc actgactgtt gttgcagatg
901 ggcttttctc caagttcagg aaaagcctgg tctccaataa agtttctgta tcatctcatt
961 ttgttggctt tcttatgaag aatgcaccac agtttaaagc aaatcatgct gaacttattt
1021 tagctaaccc gagtccagtt ctcatctacc agatttcatc cagtgaaact cgagtacttg
1081 ttgacattag aggagaaatg ccaaggaatt taagagaata catggttgaa aaaatttacc
1141 cacaaatacc tgatcacctg aaagaaccat tcttagaagc cactgacaat tctcatctga
1201 ggtccatgcc agcaagcttc cttcctcctt catcagtgaa gaaacgaggt gttcttcttt
1261 tgggagacgc atataatatg aggcatccac ttactggtgg aggaatgact gttgctttta
1321 aagatataaa actatggaga aaactgctaa agggtatccc tgacctttat gatgatgcag
1381 ctattttcga ggccaaaaaa tcattttact gggcaagaaa aacatctcat tcctttgtcg
1441 tgaatatcct tgctcaggct ctttatgaat tattttctgc cacagatgat tccctgcatc
1501 aactaagaaa agcctgtttt ctttatttca aacttggtgg cgaatgtgtt gcgggtcccg
1561 ttgggctgct ttctgtattg tctcctaacc ctctagtttt aattggacac ttctttgctg
1621 ttgcaatcta tgctgtgtat ttttgcttta agtcagaacc ttggattaca aaacctcgag
1681 cccttctcag tagtggtgct gtattgtaca aagcgtgttc tgtaatattt cctctaattt
1741 actcagaaat gaagtatatg gttcattaa
//