LOCUS AK304401 4460 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ61727 partial cds, highly similar to Laminin alpha-4 chain precursor. ACCESSION AK304401 VERSION AK304401.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4460) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4460 /clone="TRACH3034509" /clone_lib="TRACH3" /db_xref="H-InvDB:HIT000499025" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="trachea" CDS 222..>4460 /codon_start=1 /note="highly similar to Laminin alpha-4 chain precursor" /protein_id="BAH14174.1" /transl_table=1 /translation="MALSSAWRSVLPLWLLWSAACSRAASGDDNAFPFDIEGSSAVGR QDPPETSEPRVALGRLPPAAEKCNAGFFHTLSGECVPCDCNGNSNECLDGSGYCVHCQ RNTTGEHCEKCLDGYIGDSIRGAPQFCQPCPCPLPHLANFAESCYRKNGAVRCICNEN YAGPNCERCAPGYYGNPLLIGSTCKKCDCSGNSDPNLIFEDCDEVTGQCRNCLRNTTG FKCERCAPGYYGDARIAKNCAVCNCGGGPCDSVTGECLEEGFEPPTGMDCPTISCDKC VWDLTDDLRLAALSIEEGKSGVLSVSSGAAAHRHVNEINATIYLLKTKLSERENQYAL RKIQINNAENTMKSLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVEQAHDMR DKIQEINNKMLYYGEEHELSPKEISEKLVLAQKMLEEIRSRQPFFTQRELVDEEADEA YELLSQAESWQRLHNETRTLFPVVLEQLDDYNAKLSDLQEALDQALNHVRDAEDMNRA TAARQRDHEKQQERVREQMEVVNMSLSTSADSLTTPRLTLSELDDIIKNASGIYAEID GAKSELQVKLSNLSNLSHDLVQEAIDHAQDLQQEANELSRKLHSSDMNGLVQKALDAS NVYENIVNYVSEANETAEFALNTTDRIYDAVSGIDTQIIYHKDESENLLNQARELQAK AESSSDEAVADTSRRVGGALARKSALKTRLSDAVKQLQAAERGDAQQRLGQSRLITEE ANRTTMEVQQATAPMANNLTNWSQNLQHFDSSAYNTAVNSARDAVRNLTEVVPQLLDQ LRTVEQKRPASNVSASIQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHSRTSMDDLK AFTSLSLYMKPPVKRPELTETADQFILYLGSKNAKKEYMGLAIKNDNLVYVYNLGTKD VEIPLDSKPVSSWPAYFSIVKIERVGKHGKVFLTVPSLSSTAEEKFIKKGEFSGDDSL LDLDPEDTVFYVGGVPSNFKLPTSLNLPGFVGCLELATLNNDVISLYNFKHIYNMDPS TSVPCARDRLAFTQSRAASYFFDGSGYAVVRDITRRGKFGQVTRFDIEVRTPADNGLI LLMVNGSMFFRLEMRNGYLHVFYDFGFSSGPVHLEDTLKKAQINDAKYHEISIIYHND KKMILVVDRRHVKSMDNEKMKIPFTDIYIGGAPPEILQSRALRAHLPLDINFRGCMKG FQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQSFIASIQKISFFDGFEGGFN FRTLQPNGLLFYYASGSDVFSISLDNGTVIMDVKGIKVQSVDKQYNDGLSHFVISSVS PTRYELIVDKSRVGSKNPTKGKIEQTQASEKKFYFGGSPISAQYANFTGCISNAYFTR VDRDVEVEDFQRYTEKVHTSLYECPIESSPLFLLH" BASE COUNT 1283 a 1032 c 1132 g 1013 t ORIGIN 1 agtcccgaac ggccagggag aggaggtggc ctagcgctgg cggggctcac cccaatccgt 61 ctgccttttg atgccgtact ctgctggttg cgcagccacc tcgggatact gcacacggag 121 aggagggaaa ataagcgagg caccgccgca ccacgcggga gacctacgga gacccacagc 181 gcccgagccc tggaagagcg ctactggatg tcagcggaga aatggctttg agctcagcct 241 ggcgctcggt tctgcctctg tggctcctct ggagcgctgc ctgctcccgc gccgcgtccg 301 gggacgacaa cgcttttcct tttgacattg aagggagctc agcggttggc aggcaagacc 361 cgcctgagac gagcgaaccc cgcgtggctc tgggacgcct gccgcctgcg gccgagaaat 421 gcaatgctgg attctttcac accctgtcgg gagaatgtgt gccctgcgac tgtaatggca 481 attccaacga gtgtttggac ggctcaggat actgtgtgca ctgccagcgg aacacaacag 541 gagagcactg tgaaaagtgt ctggatggtt atatcggaga ttccatcagg ggagcacccc 601 aattctgcca gccgtgcccc tgtcccctgc cccacttggc caattttgca gaatcctgct 661 ataggaaaaa tggagctgtt cggtgcattt gtaacgaaaa ttatgctgga cctaactgtg 721 aaagatgtgc tcccggttac tatggaaacc ccttactcat tggaagcacc tgtaagaaat 781 gtgactgcag tggaaattca gatcccaacc tgatctttga agattgtgat gaagtcactg 841 gccagtgtag gaattgctta cgcaacacca ccggattcaa gtgtgaacgt tgcgctcctg 901 gctactatgg ggacgccagg atagccaaga actgtgcagt gtgcaactgc gggggaggcc 961 catgtgacag tgtaaccgga gaatgcttgg aagaaggttt tgaaccccct acaggcatgg 1021 actgcccaac cataagctgt gataagtgcg tctgggacct gactgatgac ctgcggttag 1081 cagcgctctc catcgaggaa ggcaaatccg gggtgctgag cgtatcctct ggggccgccg 1141 ctcataggca cgtgaatgaa atcaacgcca ccatctacct cctcaaaaca aaattgtcag 1201 aaagagaaaa ccaatacgcc ctaagaaaga tacaaatcaa caatgctgag aacacgatga 1261 aaagccttct gtctgacgta gaggaattag ttgaaaagga aaatcaagcc tccagaaaag 1321 gacaacttgt tcagaaggaa agcatggaca ccattaacca cgcaagtcag ctggtagagc 1381 aagcccatga tatgagggat aaaatccaag agatcaacaa caagatgctc tattatgggg 1441 aagagcatga acttagcccc aaggaaatct ctgagaagct ggtgttggcc cagaagatgc 1501 ttgaagagat tagaagccgt caaccatttt tcacccaacg ggagctcgtg gatgaggagg 1561 cagatgaggc ttacgaacta ctgagccagg ctgagagctg gcagcggctg cacaatgaga 1621 cccgcactct gtttcctgtc gtcctggagc agctggatga ctacaacgct aagttgtcag 1681 atctccagga agcacttgac caggccctta accatgtcag ggatgccgaa gacatgaaca 1741 gggccacagc agccaggcag cgggaccatg agaaacaaca ggaaagagtg agggaacaaa 1801 tggaagtggt gaacatgtct ctgagcacat ctgcggactc tctgacaaca cctcgtctaa 1861 ctctttcaga acttgatgat ataataaaga atgcgtcagg gatttatgca gaaatagatg 1921 gagccaaaag cgaactacaa gtaaaactat ctaacctaag taacctcagc catgatttag 1981 tccaagaagc tattgaccat gcacaggacc ttcaacaaga agctaatgaa ttgagcagga 2041 agttgcacag ttcagatatg aacgggctgg tacagaaggc tttggatgca tcaaatgtct 2101 atgaaaatat tgttaattat gttagtgaag ccaatgaaac agcagaattt gctttgaaca 2161 ccactgaccg aatttatgat gcggtgagtg ggattgatac tcaaatcatt taccataaag 2221 atgaaagtga gaacctcctc aatcaagcca gagaactgca agcaaaggca gagtctagca 2281 gtgatgaagc agtggctgac actagcaggc gtgtgggtgg agccctagca aggaaaagtg 2341 cccttaaaac cagactcagt gatgccgtta agcaactaca agcagcagag agaggggatg 2401 cccagcagcg cctggggcag tctagactga tcaccgagga agccaacagg acgacgatgg 2461 aggtgcagca ggccactgcc cccatggcca acaatctaac caactggtca cagaatcttc 2521 aacattttga ctcttctgct tacaacactg cagtgaactc tgctagggat gcagtaagaa 2581 atctgaccga ggttgtccct cagctcctgg atcagcttcg tacggttgag cagaagcgac 2641 ctgcaagcaa cgtttctgcc agcatccaga ggatccgaga gctcattgct cagaccagaa 2701 gtgttgccag caagatccaa gtctccatga tgtttgatgg ccagtcagct gtggaagtgc 2761 actcgagaac cagtatggat gacttaaagg ccttcacgtc tctgagcctg tacatgaaac 2821 cccctgtgaa gcggccggaa ctgaccgaga ctgcagatca gtttatcctg tacctcggaa 2881 gcaaaaacgc caaaaaagag tatatgggtc ttgcaatcaa aaatgataat ctggtatacg 2941 tctataattt gggaactaaa gatgtggaga ttcccctgga ctccaagccc gtcagttcct 3001 ggcctgctta cttcagcatt gtcaagattg aaagggtggg aaaacatgga aaggtgtttt 3061 taacagtccc gagtctaagt agcacagcag aggaaaagtt cattaaaaag ggggaatttt 3121 cgggagatga ctctctgctg gacctggacc ctgaggacac agtgttttat gttggtggag 3181 tgccttccaa cttcaagctc cctaccagct taaacctgcc tggctttgtt ggctgcctgg 3241 aactggccac tttgaataat gatgtgatca gcttgtacaa ctttaagcac atctataata 3301 tggacccctc cacatcagtg ccatgtgccc gagataggct ggccttcact cagagtcggg 3361 ctgccagtta cttcttcgat ggctccggtt atgccgtggt gagagacatc acaaggagag 3421 ggaaatttgg tcaggtgact cgctttgaca tagaagttcg aacaccagct gacaacggcc 3481 ttattctcct gatggtcaat ggaagtatgt ttttcagact ggaaatgcgc aatggttacc 3541 tacatgtgtt ctatgatttt ggattcagca gtggccctgt gcatcttgaa gatacgttaa 3601 agaaagctca aattaatgat gcaaaatacc atgagatctc aatcatttac cacaatgata 3661 agaaaatgat cttggtagtt gacagaaggc atgtcaagag catggataat gaaaagatga 3721 aaataccctt tacagatata tacattggag gagctcctcc agaaatctta caatccaggg 3781 ccctcagagc acaccttccc ctagatatca acttcagagg atgcatgaag ggcttccagt 3841 tccaaaagaa ggacttcaat ttactggagc agacagaaac cctgggagtt ggttatggat 3901 gcccagaaga ctcacttata tctcgcagag catatttcaa tggacagagc ttcattgctt 3961 caattcagaa aatatctttc tttgatggct ttgaaggagg ttttaatttc cgaacattac 4021 aaccaaatgg gttactattc tattatgctt cagggtcaga cgtgttctcc atctcactgg 4081 ataatggtac tgtcatcatg gatgtaaagg gaatcaaagt tcagtcagta gataagcagt 4141 acaatgatgg gctgtcccac ttcgtcatta gctctgtctc acccacaaga tatgaactga 4201 tagtagataa aagcagagtt gggagtaaga atcctaccaa agggaaaata gaacagacac 4261 aagcaagtga aaagaagttt tacttcggtg gctcaccaat cagtgctcag tatgctaatt 4321 tcactggctg cataagtaat gcctacttta ccagggtgga tagagatgtg gaggttgaag 4381 atttccaacg gtatactgaa aaggtccaca cttctcttta tgagtgtccc attgagtctt 4441 caccattgtt tctcctccat //