LOCUS AK304056 2307 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ60216 complete cds, highly similar to
Tubby-like protein 4.
ACCESSION AK304056
VERSION AK304056.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2307
/clone="TRACH3005195"
/clone_lib="TRACH3"
/db_xref="H-InvDB:HIT000498680"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="trachea"
CDS 573..2150
/codon_start=1
/note="highly similar to Tubby-like protein 4"
/protein_id="BAG64964.1"
/transl_table=1
/translation="MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEG
WLATGNGRGVVGVTFTSSHCRRDRSTPQRINFNLRGHNSEVVLVRWNEPYQKLATCDA
DGGIFVWIQYEGRWSVELVNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHW
SSEINLESQITCGIWTPDDQQVLFGTADGQVIVMDCHGRMLAHVLLHESDGVLGMSWN
YPIFLVEDSSESDTDSDDYAPPQDGPAAYPIPVQNIKPLLTVSFTSGDISLMNNYDDL
SPTVIRSGLKEVVAQWCTQGDLLAVAGMERQTQLGELPNGPLLKSAMVKFYNVRGEHI
FTLDTLVQRPIISICWGHRDSRLLMASGPALYVVRVEHRVSSLQLLCQQAIASTLRED
KDVSKLTLPPRLCSYLSTAFIPTIKPPIPDPNNMRDFVSYPSAGNERLHCTMKRTEDD
PEVGGPCYTLYLEYLGGLVPILKGRRISKLRPEFVIMDPRTDSKPGGPLTRGTGTLFS
CGHGPLTPYTPCKENVC"
BASE COUNT 577 a 579 c 613 g 538 t
ORIGIN
1 tttgtctagt tcaggaaaca tgctagaggg tggcttcaga aggaagatga tcctgtgtat
61 tctgtctctg catccgaact tttgaagaga aaaattcgag ctagagggat tcttaaagcc
121 ttaagttact tgaaatctat gtatttgcaa ccctttgtct ctggaatcat attacactaa
181 actggaatct caggctgaat gagaataacc aagtggagta aaaagaagaa aaccgtttct
241 tgatcaccac ttaattaacg atgctctttc tccaaaggat cagcacgttc ttcctctgag
301 aacttgaaaa tacaaatgga ccccatgttt ttttaagcat taccttttct tagaagactg
361 ccatcatctt ttatagagga attttttcac tatgcattcg gtggatcttt ataaaatact
421 gaccttctaa ttagattcag gtcagtctta attaaagggg gaaaaaagca acgcaagcca
481 accacaaaaa cacatatacc aatgaaagaa attggtttaa atttcacagc attaacatta
541 ctttttaagt aaaacagttc attgaagaaa gtatgtatgc agcagtggaa catgggcctg
601 tgctttgcag cgattccaac atcctgtgcc tgtcctggaa ggggcgtgtc cccaagagtg
661 agaaggagaa gcctgtgtgc aggagacgct actatgagga aggctggctg gccacgggca
721 acgggcgagg agtggttggg gtgactttca cctctagtca ctgtcgcagg gacaggagta
781 ctccacagag gataaatttc aacctccggg gccacaatag cgaggttgtg ctggtgaggt
841 ggaatgagcc ctaccagaaa ctggccacgt gcgatgcgga cggaggcata ttcgtgtgga
901 ttcagtacga gggcaggtgg tctgtggagc tggtcaacga ccgcggggcg caggtgagtg
961 atttcacgtg gagccatgat ggaactcaag cacttatttc ctatcgagat gggtttgtcc
1021 tggttgggtc tgtcagtgga caaagacact ggtcatccga aatcaacttg gaaagtcaaa
1081 ttacgtgtgg catatggact cctgacgacc aacaggtgct gtttggcacg gccgatgggc
1141 aggtgattgt catggattgc cacggcagaa tgctggccca cgtcctcttg cacgagtcag
1201 acggtgtcct cggcatgtcc tggaactacc cgatcttcct ggtggaggac agcagcgaga
1261 gcgacacgga ctcagatgac tacgcccctc cccaagatgg tccggcagca tatcccatcc
1321 cagtgcagaa catcaagcct ctgctcaccg tcagcttcac ctcgggagac atcagcttaa
1381 tgaacaacta cgatgacttg tctcccacgg tcatccgctc agggctgaaa gaggtggtag
1441 cccagtggtg cacacagggg gacttgctgg cagtcgctgg gatggaacgg cagacccagc
1501 ttggtgagct tcccaatggt ccccttctga agagtgccat ggtcaagttc tacaatgttc
1561 gtggggagca catcttcaca ctggacactc tcgtgcagcg ccccatcatc tccatctgct
1621 ggggtcaccg ggattcgagg ctgttgatgg catcaggacc agccctgtac gtggtgcgtg
1681 tggagcaccg ggtgtccagc ctgcagctgc tgtgccagca ggccatcgcc agcaccttgc
1741 gtgaggacaa ggacgtcagc aagctgactc tgcccccccg cctctgctcc tacctctcca
1801 ctgccttcat ccccaccatc aagcccccaa ttccagatcc gaacaacatg agagactttg
1861 tcagctaccc atcagccggc aacgagcggc tgcactgcac catgaagcgc acagaggacg
1921 acccggaggt gggcggcccg tgctacacgc tctacctgga gtacctgggc gggcttgtgc
1981 ccatcctcaa agggcggcgc atcagcaagc tgcggccaga gttcgtcatc atggacccgc
2041 ggacagatag caaaccaggt gggcccctca cccgagggac tgggaccttg ttctcctgtg
2101 gtcatgggcc gttaacgcct tacaccccat gcaaagagaa tgtctgctaa tgaaacgtga
2161 gcctgtgggg gctagtgtgg aacatccttg aagctacgac atttccagaa tcccattgaa
2221 atgaacagtt ctctaaatgt actttttgac aggtttttag tcatattcca tgggcagtgg
2281 atagctgggc ggtggataga tgaacca
//