LOCUS AK303104 1950 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ57245 complete cds, highly similar to Double-stranded RNA-binding protein Staufen homolog 2. ACCESSION AK303104 VERSION AK303104.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1950) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1950 /clone="THYMU2006823" /clone_lib="THYMU2" /db_xref="H-InvDB:HIT000497728" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thymus" CDS 276..1790 /codon_start=1 /note="highly similar to Double-stranded RNA-binding protein Staufen homolog 2" /protein_id="BAH13900.1" /transl_table=1 /translation="MKRGEPAIYRPLDPKPFPNYRANYNFRGMYNQRYHCPVPKIFYV QLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNGESGKDMDDDKDANK SEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRA ATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNPISRLAQIQQAKKEK EPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAAEAMLLQLGYKASTN LQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEMEASRHKVISGTTLGY LSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGLKGSSPTPPCSPVQP SKQLEYLARIQGFQVHYCDRQSGKECVTCLTLAPVQMTFHAIGSSIEASHDQAALSAL KQFSEQGLDPIDGAMNIEKGSLEKQAKHLREKADNNQAPPGSIAQDCKKSNSAV" BASE COUNT 648 a 412 c 426 g 464 t ORIGIN 1 agttctctgt agtgtttgcc aatgttggag ccgtctgcaa agtgtccccg gcaagaagag 61 gctgcctacc acaaggactt tagcttactt tttaaagatt gaagaaaaaa aagaagacag 121 aaaaagaaga actcaaagat acacaaagta atttgaacca aggctcagaa gtttttggag 181 ccgtgaggga tacagcagtt tggtcaatat tgtcttaaca tgcttcaaat aaatcaggca 241 gtataactcc aactgtggaa ctgaatgggc ttgctatgaa aaggggagag cctgccatct 301 acaggccatt agatccaaag ccattcccaa attatagagc taattacaac tttcggggca 361 tgtacaatca gaggtatcat tgcccagtgc ctaagatctt ttatgttcag ctcactgtag 421 gaaataatga attttttggg gaaggaaaga ctcgacaagc tgctagacac aatgctgcaa 481 tgaaagccct ccaagcactg cagaatgaac ctattccaga aagatctcct cagaatggtg 541 aatcaggaaa ggatatggat gatgacaaag atgcaaataa gtctgagatc agcttagtgt 601 ttgaaattgc tctgaagcga aatatgcctg tcagttttga ggttattaaa gaaagtggac 661 caccacatat gaaaagcttt gttactcgag tgtcagtagg agagttctct gcagaaggag 721 aaggaaatag caaaaaactc tccaagaagc gcgctgcgac caccgtctta caggagctta 781 aaaaacttcc acctcttcct gtggtggaaa agccaaaact attttttaaa aaacgcccta 841 aaacaatagt aaaggccgga ccagaatatg gccaagggat gaaccctatt agccgcctgg 901 cgcaaattca acaggccaaa aaggaaaagg agccggatta tgttttgctt tcagaaagag 961 gaatgcctcg acgtcgagaa tttgtgatgc aggtgaaggt aggcaatgaa gttgctacag 1021 gaacaggacc taataaaaag atagccaaaa aaaatgctgc agaagcaatg ctgttacaac 1081 ttggttataa agcatccact aatcttcagg atcaacttga gaagacaggg gaaaacaaag 1141 gatggagtgg tccaaagcct gggtttcctg aaccaacaaa taatactcca aaaggaattc 1201 ttcatttgtc tcctgatgtt tatcaagaga tggaagccag ccgccacaaa gtaatctctg 1261 gcactactct aggctatttg tcacccaaag atatgaacca accttcaagc tctttcttca 1321 gtatatctcc cacatcgaat agttcagcta caattgccag ggaactcctt atgaatggaa 1381 catcttctac agctgaagcc ataggtttaa aaggaagttc tcctactccc ccttgttctc 1441 cagtacaacc ttcaaaacaa ctggaatatt tagcaaggat tcaaggcttt caggttcact 1501 actgtgatag acaaagtggc aaagagtgtg tgacctgtct gacattagcc cctgtgcaga 1561 tgactttcca tgctattgga agctccattg aagccagcca tgatcaggca gccttaagtg 1621 ccttgaaaca attttctgaa caaggactgg atccaatcga tggagcaatg aatatcgaaa 1681 aaggttctct tgaaaaacaa gccaagcatc tgagagagaa agcggacaat aaccaggcac 1741 ccccgggctc catcgctcag gactgcaaga aatcaaactc ggccgtctag cagctcccag 1801 aacccgcggc tgccaccgca tccttataaa cctgtcagca cgcatgaggg tgtctgtgtt 1861 cagggaaatg aatgactaat accattattt gagtcttatg tgaagacaac actattctaa 1921 cacgagagat aatatacatg gtactgttta //