LOCUS AK300240 1196 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ54858 complete cds, highly similar to Protein
YIPF1.
ACCESSION AK300240
VERSION AK300240.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1196)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1196
/clone="PLACE6019058"
/clone_lib="PLACE6"
/db_xref="H-InvDB:HIT000494864"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="placenta"
CDS 159..1154
/codon_start=1
/note="highly similar to Protein YIPF1"
/protein_id="BAH13241.1"
/transl_table=1
/translation="MSGGEISSRTLQIFFLIIGRRLTGRMAAVDDLQFEEFGNAATSL
TANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDDSDKTELLAGQKKSSPFW
TFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNPDLYGPFWICATLVFAIA
ISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLALWGFLMWRNSKVMNI
VSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGISGSLLAMTFWPAVR
EDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQTVAAAKSS"
BASE COUNT 321 a 289 c 271 g 315 t
ORIGIN
1 acacttctgg gatgcacctg tctgggtgct gattggctcc agcaaggtcc catggcccca
61 tcgcatgaag aaacaagcct cgaagcagaa agtgagaagc ctgaggcata gactggaggc
121 aagctcactc aggttatatc tgctgacgct ggaataagat gagtggcggt gaaataagca
181 gcagaaccct gcaaattttc ttcctcataa ttgggagaag actcactggc cgaatggcag
241 cagtagatga cttgcaattt gaagaatttg gcaatgcagc cacttctctg acagcaaacc
301 cagatgccac cacagtaaac attgaggatc ctggtgaaac cccaaaacat cagccaggat
361 ccccaagagg ctcaggaaga gaagaagatg atgagttact gggaaatgat gactctgaca
421 aaactgagtt acttgctgga cagaagaaaa gctccccctt ctggacattt gaatactacc
481 aaacattctt tgatgtggac acctaccagg tctttgacag aattaaagga tctcttttgc
541 caatacccgg gaaaaacttt gtgaggttat atatccgcag caatccagat ctctatggcc
601 ccttttggat atgtgccacg ttggtctttg ccatagcaat tagtgggaat ctttccaact
661 tcttgatcca tctgggagag aagacgtacc attatgtgcc cgaattccga aaagtgtcca
721 tagcagctac catcatctat gcctatgcct ggctggttcc tcttgcactc tggggtttcc
781 tcatgtggag aaacagcaaa gttatgaaca tcgtctccta ttcatttctg gagattgtgt
841 gtgtctatgg atattccctc ttcatttata tccccaccgc aatactgtgg atcatccccc
901 agaaagctgt tcgttggatt ctagtcatga ttgccctggg catctcagga tctctcttgg
961 caatgacatt ttggccagct gttcgtgagg ataaccgacg cgttgcattg gccacaattg
1021 tgacaattgt gttgctccat atgctgcttt ctgtgggctg cttggcatac ttttttgatg
1081 caccagagat ggaccatctc ccaacaacta cagctactcc aaaccaaaca gttgctgcag
1141 ccaagtccag ctaatgagga aagactcact tgagataccc tctccttgct gaagtt
//