LOCUS AK298835 1742 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ54614 complete cds, highly similar to Vacuolar protein sorting-associated protein 45. ACCESSION AK298835 VERSION AK298835.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1742) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..1742 /cell_line="NT2" /cell_type="teratocarcinoma" /clone="NT2NE2010559" /clone_lib="NT2NE2" /db_xref="H-InvDB:HIT000493459" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="mRNA from NT2 neuron after the differentiation of NT2 neuronal precursor cells." /organism="Homo sapiens" CDS 57..1394 /codon_start=1 /note="highly similar to Vacuolar protein sorting-associated protein 45" /protein_id="BAH12880.1" /transl_table=1 /translation="MNVVFAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSL KKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLL NQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGS NIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVS ERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYALHYERHSSN SLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGV ENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALT VYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRSASRR" BASE COUNT 510 a 371 c 415 g 446 t ORIGIN 1 aatttagcca gaaaaggggg cgggaagggc tgtagggtac ttgtcaattc gccgccatga 61 acgtggtttt tgctgtgaac ccacatttgt tttccctcaa tattttgggt tgctgccagg 121 gtcgaaattg ggatccagcc cagctatcta gaacaactca agggcttaca gctctccttt 181 tatctctgaa gaagtgtccc atgattcgtt atcagctctc atcagaggca gcaaagagac 241 ttgcagagtg cgttaagcaa gtgataacta aagaatatga actgtttgaa ttccgtcgga 301 cagaggttcc tccattgctc cttattttag atcgctgtga tgatgccatc accccattgc 361 taaaccagtg gacatatcag gccatggtcc acgaactact aggcataaac aacaatcgga 421 ttgatctttc cagagtgccg ggaatcagta aagacttaag agaagtggtc ctatctgctg 481 aaaatgatga attctatgct aataatatgt acctgaactt tgctgagatt ggtagcaata 541 taaagaatct catggaagat tttcagaaga agaaaccaaa agaacagcaa aaactagaat 601 caatagcaga catgaaggcg tttgttgaga attatccaca gttcaagaaa atgtctggga 661 ctgtttcaaa gcatgtgaca gtggttggag aactgtctcg attggtcagt gaacggaatc 721 tgctggaggt ttcagaggtt gagcaagaac tggcctgtca aaatgaccat tctagtgctc 781 tccagaatat aaaaaggctt ctgcagaacc ccaaagtgac agagtttgat gctgcccgcc 841 tggtgatgct ttatgcttta cattatgagc gacacagcag caatagcctg ccaggactaa 901 tgatggacct caggaataaa ggtgtttctg agaagtatcg aaagctcgtg tctgcagttg 961 ttgaatatgg tggtaaacga gtcagaggaa gtgacctctt cagccccaaa gatgctgtgg 1021 ctatcaccaa acaattcctc aaaggactga agggagtaga aaatgtatat acacagcatc 1081 aacctttcct acatgaaacc ctggatcatc tcatcaaagg aaggcttaag gaaaacctat 1141 atccttattt aggccccagc acactcagag acagacctca ggatatcatt gtgtttgtaa 1201 ttggaggagc cacctatgaa gaggctctaa cagtttataa cctgaaccgc accactcctg 1261 gagtgaggat tgtcctggga ggcaccacag tgcacaacac gaaaagtttc ctagaggaag 1321 ttctggcttc tggactgcac agccgaagca aggagagctc tcaagtcaca tcaaggtcag 1381 cgagcagaag atgaaacggt ggttggggga agggcacagc ttcctctctt gtccccacta 1441 caggttttcc ctactaaaca aaggtgttgg agagcagctt tgggttctgt gctggttgtt 1501 agaactcatc tccaggtagc ccacggatac gtggttggca cagacacaag actcccagag 1561 ttgtcctaac aataagtctg agcccatctc aacccacttt tctccggtag tctttatgta 1621 tctgttagca caatcacttc agttactgat gaattttgtt gggatctgac ttggggaaag 1681 ggttatcaga gcctagaggg gcttaaaaag taatcatttg atgtacatac cacactcctt 1741 gg //