LOCUS       AK298835                1742 bp    mRNA    linear   HUM 21-JAN-2009
DEFINITION  Homo sapiens cDNA FLJ54614 complete cds, highly similar to
            Vacuolar protein sorting-associated protein 45.
ACCESSION   AK298835
VERSION     AK298835.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1742)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project focused on splicing variants
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..1742
                     /cell_line="NT2"
                     /cell_type="teratocarcinoma"
                     /clone="NT2NE2010559"
                     /clone_lib="NT2NE2"
                     /db_xref="H-InvDB:HIT000493459"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /note="mRNA from NT2 neuron after the differentiation of
                     NT2 neuronal precursor cells."
                     /organism="Homo sapiens"
     CDS             57..1394
                     /codon_start=1
                     /note="highly similar to Vacuolar protein
                     sorting-associated protein 45"
                     /protein_id="BAH12880.1"
                     /transl_table=1
                     /translation="MNVVFAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSL
                     KKCPMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLL
                     NQWTYQAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGS
                     NIKNLMEDFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVS
                     ERNLLEVSEVEQELACQNDHSSALQNIKRLLQNPKVTEFDAARLVMLYALHYERHSSN
                     SLPGLMMDLRNKGVSEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGV
                     ENVYTQHQPFLHETLDHLIKGRLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALT
                     VYNLNRTTPGVRIVLGGTTVHNTKSFLEEVLASGLHSRSKESSQVTSRSASRR"
BASE COUNT          510 a          371 c          415 g          446 t
ORIGIN      
        1 aatttagcca gaaaaggggg cgggaagggc tgtagggtac ttgtcaattc gccgccatga
       61 acgtggtttt tgctgtgaac ccacatttgt tttccctcaa tattttgggt tgctgccagg
      121 gtcgaaattg ggatccagcc cagctatcta gaacaactca agggcttaca gctctccttt
      181 tatctctgaa gaagtgtccc atgattcgtt atcagctctc atcagaggca gcaaagagac
      241 ttgcagagtg cgttaagcaa gtgataacta aagaatatga actgtttgaa ttccgtcgga
      301 cagaggttcc tccattgctc cttattttag atcgctgtga tgatgccatc accccattgc
      361 taaaccagtg gacatatcag gccatggtcc acgaactact aggcataaac aacaatcgga
      421 ttgatctttc cagagtgccg ggaatcagta aagacttaag agaagtggtc ctatctgctg
      481 aaaatgatga attctatgct aataatatgt acctgaactt tgctgagatt ggtagcaata
      541 taaagaatct catggaagat tttcagaaga agaaaccaaa agaacagcaa aaactagaat
      601 caatagcaga catgaaggcg tttgttgaga attatccaca gttcaagaaa atgtctggga
      661 ctgtttcaaa gcatgtgaca gtggttggag aactgtctcg attggtcagt gaacggaatc
      721 tgctggaggt ttcagaggtt gagcaagaac tggcctgtca aaatgaccat tctagtgctc
      781 tccagaatat aaaaaggctt ctgcagaacc ccaaagtgac agagtttgat gctgcccgcc
      841 tggtgatgct ttatgcttta cattatgagc gacacagcag caatagcctg ccaggactaa
      901 tgatggacct caggaataaa ggtgtttctg agaagtatcg aaagctcgtg tctgcagttg
      961 ttgaatatgg tggtaaacga gtcagaggaa gtgacctctt cagccccaaa gatgctgtgg
     1021 ctatcaccaa acaattcctc aaaggactga agggagtaga aaatgtatat acacagcatc
     1081 aacctttcct acatgaaacc ctggatcatc tcatcaaagg aaggcttaag gaaaacctat
     1141 atccttattt aggccccagc acactcagag acagacctca ggatatcatt gtgtttgtaa
     1201 ttggaggagc cacctatgaa gaggctctaa cagtttataa cctgaaccgc accactcctg
     1261 gagtgaggat tgtcctggga ggcaccacag tgcacaacac gaaaagtttc ctagaggaag
     1321 ttctggcttc tggactgcac agccgaagca aggagagctc tcaagtcaca tcaaggtcag
     1381 cgagcagaag atgaaacggt ggttggggga agggcacagc ttcctctctt gtccccacta
     1441 caggttttcc ctactaaaca aaggtgttgg agagcagctt tgggttctgt gctggttgtt
     1501 agaactcatc tccaggtagc ccacggatac gtggttggca cagacacaag actcccagag
     1561 ttgtcctaac aataagtctg agcccatctc aacccacttt tctccggtag tctttatgta
     1621 tctgttagca caatcacttc agttactgat gaattttgtt gggatctgac ttggggaaag
     1681 ggttatcaga gcctagaggg gcttaaaaag taatcatttg atgtacatac cacactcctt
     1741 gg
//