LOCUS AK298525 2398 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ54651 partial cds, highly similar to Homo
sapiens neuron navigator 3 (NAV3), mRNA.
ACCESSION AK298525
VERSION AK298525.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2398)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2398
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2005629"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000493149"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 25..>2398
/codon_start=1
/note="highly similar to Homo sapiens neuron navigator 3
(NAV3), mRNA"
/protein_id="BAG60728.1"
/transl_table=1
/translation="MTSLHTSSESIDLPLSHHGSLSGLTTGTHEVQSLLMRTGSVRST
LSERYTPSSRQANQEEGKEWLRSHSTGGLQDTGNQSPLVSPSAMSSSAAGKYHFSNLV
SPTNLSQFNLPGPSMMRSNSIPAQDSSFDLYDDSQLCGSATSLEERPRAISHSGSFRD
SMEEVHGSSLSLVSSTSSLYSTAEEKAHSEQIHKLRRELVASQEKVATLTSQLSANAH
LVAAFEKSLGNMTGRLQSLTMTAEQKESELIELRETIEMLKAQNSAAQAAIQGALNGP
DHPPKDLRIRRQHSSESVSSINSATSHSSIGSGNDADSKKKKKKNWLRSSFKQAFGKK
KSTKPPSSHSDIEELTDSSLPASPKLPHNAGDCGSASMKPSQSASAICECTEAEAEII
LQLKSELREKELKLTDIRLEALSSAHHLDQIREAMNRMQNEIEILKAENDRLKAETGN
TAKPTRPPSESSSSTSSSSSRQSLGLSLNNLNITEAVNSDILLDDAGDATGHKDGRSV
KIIVSISKGYGRAKDQKSQAYLIGSIGVSGKTKWDVLDGVIRRLFKEYVFRIDTSTSL
GLSSDCIASYCIGDLIRSHNLEVPELLPCGYLVGDNNIITVNLKGVEENSLDSFVFDT
LIPKPITQRYFNLLMEHHRIILSGPSGTGKTYLANKLAEYVITKSGRKKTEDAIATFN
VDHKSSKELQQYLANLAEQCSADNNGVELPVVIILDNLHHVGSLSDIFNGFLNCKYNK
CPYIIGTMNQGVSSSPNLELHHNFRWVLCANHTEPVKGFLGRYLRRKLIEI"
BASE COUNT 723 a 550 c 516 g 609 t
ORIGIN
1 aaggatactc cgagctacca gtccatgact agcctccaca cgagctctga gtccattgac
61 ctccccctca gccatcatgg ctccttgtct ggactgacca caggcactca cgaggtccag
121 agcctgctca tgagaacggg tagtgtgaga tctactctct cagaaagata taccccatca
181 tctcggcagg ccaaccaaga agagggcaaa gagtggttgc gttctcattc tactggaggg
241 cttcaggaca ctggcaacca gtcacctctg gtttcccctt ctgccatgtc atcttctgca
301 gctggaaaat accacttttc taacttggtg agcccaacaa atttgtctca atttaacctt
361 cccgggccca gcatgatgcg ctcaaacagc atcccagccc aagactcttc cttcgatctc
421 tatgatgact cccagctttg tgggagtgcc acttctctgg aggaaagacc tcgtgccatc
481 agtcattcgg gctcattcag agacagcatg gaagaagttc atggctcttc attatcactg
541 gtgtccagca cttcttctct ttactctaca gctgaagaaa aggctcattc agagcaaatc
601 cataaactgc ggagagagct ggttgcatca caagaaaaag ttgctaccct cacatctcag
661 ctttcagcaa atgctcacct tgtagcagct tttgaaaaga gcttagggaa tatgactggc
721 cgattgcaaa gtctaactat gacagcggaa caaaaggaat ctgaacttat agaactaaga
781 gaaaccattg aaatgctgaa ggctcagaat tctgctgccc aggcggctat tcagggagca
841 ctgaatggtc cagaccatcc tcccaaagat cttcgcatca gaagacagca ttcctctgaa
901 agtgtttcta gtatcaacag tgccacaagc cattccagta ttggcagtgg taatgatgcc
961 gactccaaga agaagaaaaa gaaaaactgg ctgagaagtt ctttcaaaca agcctttggg
1021 aagaaaaagt ccaccaagcc tccttcatca cattctgaca ttgaagagct tactgattca
1081 tcccttccgg catcccccaa gttaccccat aatgctggtg actgtggctc agcatccatg
1141 aagccctcac aatctgcttc agcgatctgt gaatgcacag aagctgaggc agagataatt
1201 ctgcagctga agagcgagct cagagaaaag gaattaaaat taacggatat tcggctggag
1261 gccctcagct ctgctcatca tcttgatcag atccgggaag ccatgaaccg gatgcagaat
1321 gaaattgaaa tactgaaagc tgaaaatgac cggttgaagg cagaaactgg taacacagct
1381 aagcctactc ggccaccgtc agaatcctca agcagcacct cctcttcatc ttccaggcag
1441 tcattaggac tttctctaaa caatttgaac atcacagagg ctgttaactc agatattttg
1501 ctagatgatg ctggtgatgc aactggacat aaagatggcc gcagtgtgaa aattatagtc
1561 tccataagca agggctatgg tcgagcaaag gaccaaaaat ctcaggcata tttgatagga
1621 tccattggtg ttagtggaaa aaccaagtgg gatgtcttag atggtgtaat aagacgtctc
1681 tttaaggaat atgtattccg aattgataca tccactagcc ttggtctgag ctctgactgc
1741 attgctagct actgtatagg agacttaatt agatcccata acctagaagt gcctgaattg
1801 ctgccttgtg gataccttgt tggagataat aacatcatca ctgtgaacct caaaggggta
1861 gaagaaaata gtttggacag ttttgttttt gatacgctga ttcctaaacc aattacccaa
1921 aggtacttta acttgttgat ggagcatcac agaattatac tctcaggacc gagtggtact
1981 ggaaagacct atttggcaaa caaacttgct gaatatgtaa taaccaaatc tggaaggaaa
2041 aaaacagagg atgcaattgc cacttttaat gtggaccaca agtcaagtaa ggaattgcaa
2101 caatatctag ctaacctggc tgaacagtgc agtgctgata ataatggagt ggagctccca
2161 gttgtaataa ttcttgataa tcttcatcat gtgggctctc tgagtgatat cttcaatggt
2221 tttctcaatt gtaaatacaa caaatgtcca tatattattg gaacaatgaa tcagggagtt
2281 tcttcatcac caaatctaga gctgcatcac aatttcaggt gggtattatg tgcaaatcat
2341 acagaaccag tgaaaggctt tttaggcaga tatcttcgaa gaaaactcat agagatag
//