LOCUS AK296751 1556 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ52931 complete cds, highly similar to Homo
sapiens abl-interactor 1 (ABI1), transcript variant 3, mRNA.
ACCESSION AK296751
VERSION AK296751.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1556)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1556
/clone="CTONG2007895"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000491375"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 177..1133
/codon_start=1
/note="highly similar to Homo sapiens abl-interactor 1
(ABI1), transcript variant 3, mRNA"
/protein_id="BAG59334.1"
/transl_table=1
/translation="MERPVRYIRKPIDYTVLDDVGHGVKHGNNQPARTGTLSRTNPPT
QKPPSPPMSGRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRP
RTHSGSSGGSGSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAPGSQYGTMTRQISRH
NSTTSSTSSGGYRRTPSVTAQFSAQPHVNGGPLYSQNSIADSPTPPPPPPPDDIPMFD
DSPPPPPPPPVDYEDEEAAVVQYNDPYADGDPAWAPKNYIEKVVAIYDYTKDKDDELS
FMEGAIIYVIKKNDDGWYEGVCNRVTGLFPGNYVESIMHYTD"
BASE COUNT 459 a 332 c 336 g 429 t
ORIGIN
1 aagcgatgca gaggggtgga aaatggcaga gctgcagatg ttactagagg aggagatccc
61 gtctggcaag agggcgctga tcgagagtta ccagaacctg actcgggtgg cagactactg
121 tgaaaacaac aaataagaat acatcaagaa ctcacaaaat aatagcacct gcgaatatgg
181 agcgccctgt aaggtatatt cggaaaccta tcgattacac agttctggat gatgtgggcc
241 atggtgtcaa gcatggaaat aaccagcctg caagaactgg cacactgtcg agaacaaatc
301 ctcctactca gaaaccgcca agtcctccca tgtcaggccg gggaacactg ggacggaata
361 ctccttataa aaccctggaa cctgttaaac ccccaacagt tcctaatgac tatatgacca
421 gtcctgctag gcttggaagt cagcatagtc caggcaggac agcatcttta aatcagagac
481 caaggacaca cagtggaagt agtggaggaa gtggaagtcg agaaaacagt ggtagcagta
541 gtattggcat tcccattgct gtgcctacac cttcgccacc cactattgga ccagcagccc
601 cgggctcagc tcctggttcc cagtatggca caatgaccag gcagatatct cgacacaact
661 ctactacttc ttcgacatct tctggtggat acagacgaac tccctctgtg actgctcaat
721 tttctgctca gcctcatgtt aatggaggtc cactttattc tcaaaattca attgctgata
781 gtccaactcc accgccacca cctccaccag atgacattcc catgtttgat gactctccac
841 ctcccccacc accaccacca gtggattatg aagatgagga ggctgcagta gttcagtata
901 atgatccata tgcagatggg gatcctgctt gggcccccaa gaattatatt gagaaagttg
961 ttgcaatata tgattataca aaagacaagg atgatgagct gtcatttatg gagggtgcaa
1021 tcatttatgt tataaagaag aatgatgatg gctggtatga aggagtctgc aatcgagtga
1081 ctggtctgtt ccctgggaac tatgttgaat caatcatgca ctatactgat taattttttt
1141 ttcttttgaa gtagattctt attactcagt catactgtgg gactattatg gttaacagaa
1201 ctgccttaat atgttttaaa atgtgcccat attttcagaa catgctgttt tattggtaaa
1261 ttgaatgtct acctgtaagc ataaatcttt gaggcagttt atgtattgct gaatagcaat
1321 ttatacaaga agctgtccat aactgattat gcttatgtac ttacttacac atttttaact
1381 ttatgaccag cctaaatatt ctgggggaag tggggtataa tatttaacga atcatgaatt
1441 gtaccattac atgtttcagt gcagcatggt tactaacgct atgtcagact aatattaaaa
1501 tcagaaaatt taaatgctgg tgctggtcag actttttttg ttagattctc tcattt
//