LOCUS AK296214 2094 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ53343 complete cds, highly similar to Histone deacetylase 9. ACCESSION AK296214 VERSION AK296214.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2094) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..2094 /clone="BRTHA2021659" /clone_lib="BRTHA2" /db_xref="H-InvDB:HIT000490838" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="thalamus" CDS 88..1737 /codon_start=1 /note="highly similar to Histone deacetylase 9" /protein_id="BAH12283.1" /transl_table=1 /translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQEL LEKEQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSAT KDTPTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPL RKTESSVSSSSPGSGPSSPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMN LLSLYTSPSLPNITLGLPAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPAS SSHPHVTLEGKPPNSSHQALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPG IRGTHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKS IEQLKQPGSHLEEAEEELQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKE EPVDSDEDAQIQEMESGEQAAFMQQVIGKDLAPGFVIKVII" BASE COUNT 638 a 497 c 473 g 486 t ORIGIN 1 ggagagagct atagcatcca ctctgtcctt tctgctttgc acacagatgg ggtggctgga 61 cgagagcagc tcttggctca gcaaagaatg cacagtatga tcagctcagt ggatgtgaag 121 tcagaagttc ctgtgggcct ggagcccatc tcacctttag acctaaggac agacctcagg 181 atgatgatgc ccgtggtgga ccctgttgtc cgtgagaagc aattgcagca ggaattactt 241 cttatccagc agcagcaaca aatccagaag cagcttctga tagcagagtt tcagaaacag 301 catgagaact tgacacggca gcaccaggct cagcttcagg agcatatcaa gttgcaacag 361 gaacttctag ccataaaaca gcaacaagaa ctcctagaaa aggagcagaa actggagcag 421 cagaggcaag aacaggaagt agagaggcat cgcagagaac agcagcttcc tcctctcaga 481 ggcaaagata gaggacgaga aagggcagtg gcaagtacag aagtaaagca gaagcttcaa 541 gagttcctac tgagtaaatc agcaacgaaa gacactccaa ctaatggaaa aaatcattcc 601 gtgagccgcc atcccaagct ctggtacacg gctgcccacc acacatcatt ggatcaaagc 661 tctccacccc ttagtggaac atctccatcc tacaagtaca cattaccagg agcacaagat 721 gcaaaggatg atttccccct tcgaaaaact gaatcctcag tcagtagcag ttctccaggc 781 tctggtccca gttcaccaaa caatgggcca actggaagtg ttactgaaaa tgagacttcg 841 gttttgcccc ctacccctca tgccgagcaa atggtttcac agcaacgcat tctaattcat 901 gaagattcca tgaacctgct aagtctttat acctctcctt ctttgcccaa cattaccttg 961 gggcttcccg cagtgccatc ccagctcaat gcttcgaatt cactcaaaga aaagcagaag 1021 tgtgagacgc agacgcttag gcaaggtgtt cctctgcctg ggcagtatgg aggcagcatc 1081 ccggcatctt ccagccaccc tcatgttact ttagagggaa agccacccaa cagcagccac 1141 caggctctcc tgcagcattt attattgaaa gaacaaatgc gacagcaaaa gcttcttgta 1201 gctggtggag ttcccttaca tcctcagtct cccttggcaa caaaagagag aatttcacct 1261 ggcattagag gtacccacaa attgccccgt cacagacccc tgaaccgaac ccagtctgca 1321 cctttgcctc agagcacgtt ggctcagctg gtcattcaac agcaacacca gcaattcttg 1381 gagaagcaga agcaatacca gcagcagatc cacatgaaca aactgctttc gaaatctatt 1441 gaacaactga agcaaccagg cagtcacctt gaggaagcag aggaagagct tcagggggac 1501 caggcgatgc aggaagacag agcgccctct agtggcaaca gcactaggag tgacagcagt 1561 gcttgtgtgg atgacacact gggacaagtt ggggctgtga aggtcaagga ggaaccagtg 1621 gacagcgatg aagatgctca gatccaggaa atggaatctg gggagcaggc tgcttttatg 1681 caacaggtaa taggcaaaga tttagctcca ggatttgtaa ttaaagtcat tatctgaaca 1741 tgaaatgcat tgcaggtttg gtaaatggat atgatttcct atcagtttat atttctctat 1801 gatttgagtt cagtgtttaa ggattctacc taatgcagat atatgtatat atctatatag 1861 aggtctttct atatactgat ctctatatag atatcaatgt ttcattgaaa atccactggt 1921 aaggaaatac ctgttatact aaaattatga tacataatat ctgagcagtt aataggcttt 1981 aaatttatcc caaagcctgc tacaccaatt acttctaaag aaaacaaatt cactgttatt 2041 ttgagtttat gtgttgagat cagtgactgc tggatagtct cccagtctga tcaa //