LOCUS AK295027 3653 bp mRNA linear HUM 24-JUL-2008
DEFINITION Homo sapiens cDNA FLJ56434 complete cds, highly similar to
p130Cas-associated protein.
ACCESSION AK295027
VERSION AK295027.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3653)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3653
/clone="BRAWH3033542"
/clone_lib="BRAWH3"
/db_xref="H-InvDB:HIT000489651"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 271..3378
/codon_start=1
/note="highly similar to p130Cas-associated protein"
/protein_id="BAG58083.1"
/transl_table=1
/translation="MSEAELPLGFSRMNRFRQSLPLSRSASQTRLRSPGVLFLQFGEE
TRRVHITHEVSSLDTLHALIAHMFPQKLTMGMLKSPNTAILIKDEARNVFYELEDVRD
IQDRSIIKIYRKEPLYAAFPGSHLTNGDLRREMVYASRESSPTRRLNNLSPAPHLASG
SPPPGLPSGLPSGLQSGSPSRSRLSYAGGRPPSYAGSPVHHAAERLGGAPAAQGVSPS
PSAILERRDVKPDEDLASKAGGMVLVKGEGLYADPYGLLHEGRLSLAAAAGDPFAYPG
AGGLYKRGSVRSLSTYSAAALQSDLEDSLYKAAGGGGPLYGDGYGFRLPPSSPQKLAD
VAAPPGGPPPPHSPYSGPPSRGSPVRQSFRKDSGSSSVFAESPGGKTRSAGSASTAGT
PPSELFPGPGERSLVGFGPPVPAKDTETRERMEAMEKQIASLTGLVQSALLRGSEPET
PSEKIEGSNGAATPSAPCGSGGRSSGATPVSGPPPPSASSTPAGQPTAVSRLQMQLHL
RGLQNSASDLRGQLQQLRKLQLQNQESVRALLKRTEAELSMRVSEAARRQEDPLQRQR
TLVEEERLRYLNDEELITQQLNDLEKSVEKIQRDVSHNHRLVPGPELEEKALVLKQLG
ETLTELKAHFPGLQSKMRVVLRVEVEAVKFLKEEPQRLDGLLKRCRGVTDTLAQIRRQ
VDEGVWPPPNNLLSQSPKKVTAETDFNKSVDFEMPPPSPPLNLHELSGPAEGASLTPK
GGNPTKGLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKA
IPDLDCASKAHPGPAPTPDHKPPKAPHGQKAAPRTEPSGRRGSDELTVPRYRTEKPSK
SPPPPPPRRSFPSSHGLTTTRTGEVVVTSKKDSAFIKKAESEELEVQKPQVKLRRAVS
EVARPASTPPIMASAIKDEDDEDRIIAELEVFERSSVSSLPPTPRRQLIPTLLSPQDL
GPPGGSAPGPTRKSGGGSVPPMKVVTPGASRLKAAQGQAGSPDKSKHGKQRAEYMRIQ
AQQQV"
BASE COUNT 694 a 1240 c 1202 g 517 t
ORIGIN
1 gcattgcagc aaagggcacc ggcggcggcg gccgcggctg cggaggcggc cgggggagag
61 aagagcccgg gcgggtggga gtaggggccc tccctcccca gccggacgca ggacctgggg
121 ctggggaccc cgcacgtaca cctgtggccg cagcagccaa actactggag tttcaagacc
181 cgcagctcac gccacactca gggagcccag cccgggctgg cagaccaggc ggcaaagctg
241 tcctacgcct ccgccgagtc gctggagacc atgtcggagg ccgagctgcc cctgggcttc
301 agcaggatga accgcttccg acagagcctg cctctctccc gctcggccag ccagaccagg
361 ctgcgctccc caggggtgct gttcctgcag ttcggggagg agactcggcg cgtgcacatc
421 acgcacgagg tcagcagcct ggacacgctg cacgcactca tcgcgcacat gttcccgcag
481 aagctcacca tgggcatgct taagtcgccc aataccgcca tcctcatcaa agacgaggct
541 cgcaacgtct tctacgagct ggaggacgtc cgggacatcc aggaccgcag tattatcaag
601 atctacagaa aggagcccct ctacgctgcc ttccctggct cacatctcac caacggggac
661 ctccggagag agatggtgta cgcatcgcgg gagtcctcgc ccacgcggcg cctcaacaac
721 ctgtcaccag cgccgcacct ggcatccggc tcgccgccgc ccgggctgcc gtcggggctg
781 ccgtccgggc tgcagtccgg ttcgccgtcg cgttcgcgcc tatcgtacgc cggggggcgc
841 ccgccttcgt acgccggcag cccggtgcac cacgcggccg agaggctggg aggcgccccg
901 gccgcccagg gcgtcagccc cagccccagc gccatcctgg agcggcgcga cgtgaagccg
961 gacgaggacc tggcgagcaa ggcgggcggc atggtgctgg tgaaaggcga gggcctctat
1021 gctgacccct acgggctgct gcacgagggc cgtctgagcc tggccgcggc cgccggcgac
1081 ccgttcgcct acccgggcgc cggcggcctc tacaagcgcg gctcggtgcg ctcgctcagc
1141 acctactcgg ccgccgcgct gcagtccgat ctggaggact ccctgtacaa ggcggcgggc
1201 ggcggcggcc cgctgtacgg cgacggctac ggcttccgcc tgccgccttc gtcaccgcag
1261 aagctggccg acgtggcagc accccccgga ggtcccccgc caccgcacag cccctactcg
1321 gggccgccca gccgcggctc gccagtgcgc cagtccttcc gcaaggactc gggctcctcg
1381 tccgtctttg ccgagagtcc tggagggaag acccgcagcg cggggagcgc ctcgacggcc
1441 ggaactcccc cttcggagct cttccctggg cctggggaac gctcgctggt tgggttcggg
1501 ccgccagtgc cagccaagga cacggagacc agggagcgca tggaggccat ggagaagcag
1561 attgccagcc tcacaggcct ggtgcagagc gccttactgc gaggctctga gcctgagacc
1621 cccagcgaga agattgaagg ctccaatgga gcagccaccc cctcagcacc ctgtgggtca
1681 ggcggccgga gcagcggggc caccccggtg tccggcccgc ccccgccctc ggccagcagc
1741 acccccgcag gtcagcctac cgccgttagc cggctgcaga tgcagcttca cctgcgaggc
1801 ctgcagaaca gcgccagtga cttgcgcggc cagctccagc agttgcgcaa gctccagcta
1861 cagaaccagg agtcggtgcg cgcgctgctg aagcgcacgg aggcagagct gagcatgcgc
1921 gtgtcggagg cggcgcggcg gcaggaggac ccgctgcagc ggcagcgcac cctggtggaa
1981 gaggaacggc tgcgctatct caacgacgag gagcttatta cccagcagct caatgacctg
2041 gagaaatcgg tggagaagat ccagagagac gtgtcccaca accaccggct ggtgcccggc
2101 cctgagctgg aggagaaggc actggtgctg aagcagctcg gggagacgct gacagagctc
2161 aaggctcact tcccgggcct gcagagcaag atgcgggtgg tgctgcgcgt ggaggtggag
2221 gcggtgaagt tcctgaagga ggagccccag cgcctggatg ggctcctcaa gcgctgccgc
2281 ggggtcacgg acacgctggc ccagatccga aggcaagtgg atgagggtgt gtggccaccc
2341 cccaacaatc tcctgagtca gtcccccaag aaggtgacgg cagagactga cttcaacaag
2401 agcgtggact tcgaaatgcc accccccagc cccccgctga acctgcatga gctgagcggg
2461 ccagctgaag gagcctctct tacccccaag gggggcaacc ccaccaaagg cctggacact
2521 cctggcaaga gaagcgtgga caaagctgtg tctgttgagg ctgcagagcg agactgggag
2581 gagaagcggg cagccctgac ccagtacagt gccaaggaca tcaaccggct gctggaagag
2641 acacaggcag agctgctcaa ggccatccct gacctggact gtgccagcaa ggcccatcca
2701 ggcccggccc ccactccaga tcacaagccc cccaaggccc cccacggcca gaaggcagcc
2761 ccccgaacgg agcccagtgg gaggaggggc tcagatgagt tgaccgtgcc ccgataccgc
2821 acagagaagc cctccaagtc gcccccaccg ccccctcccc gccggagctt cccctcctcc
2881 catggcctga ccaccacacg taccggagag gtggtggtca ccagcaagaa ggactcggcc
2941 ttcatcaaga aggctgagtc cgaggagctg gaggtgcaga agccccaggt gaagctgcgc
3001 cgggctgtgt ctgaggtggc ccgcccagcc tccacaccac ccatcatggc ctcggccatc
3061 aaggacgagg atgacgagga tcgcatcatc gcagagctag aggtgtttga gagaagctca
3121 gtgtcttccc tcccccccac gccccgccgc cagctgatcc ccaccttgct gtccccccag
3181 gacctggggc cccccggggg ctcagcccca ggccctacac ggaagagtgg cggaggcagt
3241 gtaccaccca tgaaggtggt gactccgggg gcctctcggc tgaaggcggc ccagggccag
3301 gcgggcagcc ccgacaaaag caaacatggc aagcagaggg ccgagtacat gcggatccag
3361 gcccagcagc aggtctaatg agcaggcgcg gaggctgtgt ggagagtgga catacctcac
3421 ctgtgggtgt ttactgccct tgtggcctgg tcagaggctg cagggtggct cctggaccca
3481 gatgttgtga gagaccctta gtgcactcgt ttgatttagt taatatttat gagcagctcc
3541 tgtatgacag gcccattctg ggtgtgaggg tgggggctgt gatatatcca gatgctctca
3601 cttaaagaag gttctagact cagaggcaag acgttagaga aggttctaga ctc
//