LOCUS AK294528 3551 bp mRNA linear HUM 21-JAN-2009 DEFINITION Homo sapiens cDNA FLJ59503 complete cds, highly similar to Semaphorin-5B precursor. ACCESSION AK294528 VERSION AK294528.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3551) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3551 /clone="BRAMY3017263" /clone_lib="BRAMY3" /db_xref="H-InvDB:HIT000489152" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="amygdala" CDS 298..3471 /codon_start=1 /note="highly similar to Semaphorin-5B precursor" /protein_id="BAH11799.1" /transl_table=1 /translation="MVLAGPLAVSLLLPSLTLLVSHLSSSQDVSSEPSSEQQLCALSK HPTVAFEDLQPWVSNFTYPGARDFSQLALDPSGNQLIVGARNYLFRLSLANVSLLQAT EWASSEDTRRSCQSKGKTEEECQNYVRVLIVAGRKVFMCGTNAFSPMCTSRQVGNLSR TIEKINGVARCPYDPRHNSTAVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQ YNSKWLNEPNFVAAYDIGLFAYFFLRENAVEHDCGRTVYSRVARVCKNDVGGRFLLED TWTTFMKARLNCSRPGEVPFYYNELQSAFHLPEQDLIYGVFTTNVNSIAASAVCAFNL SAISQAFNGPFRYQENPRAAWLPIANPIPNFQCGTLPETGPNENLTERSLQDAQRLFL MSEAVQPVTPEPCVTQDSVRFSHLVVDLVQAKDTLYHVLYIGTESGTILKALSTASRS LHGCYLEELHVLPPGRREPLRSLRILHSARALFVGLRDGVLRVPLERCAAYRSQGACL GARDPYCGWDGKQQRCSTLEDSSNMSLWTQNITACPVRNVTRDGGFGPWSPWQPCEHL DGDNSGSCLCRARSCDSPRPRCGGLDCLGPAIHIANCSRNGAWTPWSSWALCSTSCGI GFQVRQRSCSNPAPRHGGRICVGKSREERFCNENTPCPVPIFWASWGSWSKCSSNCGG GTQSRRRACENGNSCLGCGVEFKTCNPEGCPEVRRNTPWTPWLPVNVTQGGARQEQRF RFTCRAPLADPHGLQFGRRRTETRTCPADGSGSCDTDALVEVLLRSGSTSPHTVSGGW AAWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGLPCVGDAAEYQDCNPQACPGEDICL GLHTEEALCATQACPEGWSPWSEWSKCTDDGAQSRSRHCEELLPGSSACAGNSSQSRP CPYSEIPVILPASSMEEATDCAGFNLIHLVATGISCFLGSGLLTLAVYLSCQHCQRQS QESTLVHPATPNHLHYKGGGTPKNEKYTPMEFKTLNKNNLIPDDRANFYPLQQTNVYT TTYYPSPLNKHSFRPEASPGQRCFPNS" BASE COUNT 639 a 1216 c 1075 g 621 t ORIGIN 1 gtgccagagc ccagctccgc cgagccgggc gggtcggcag cgcatccagc ggctgctggg 61 agcccgagcg cagcgggcgc gggcccgggt ggggactgca ccggagcgct gagagctgga 121 ggccgttcct gcgcggccgc cccattccca gaccggccgc cagcccatct ggttagctcc 181 cgccgctccg cgccgcccgg gagtcgggag ccgcggggaa ccgggcacct gcacccgcct 241 ctgggaggtc ttctcccctg tctgcctccc ggagctagga ctgcagaggg gcctatcatg 301 gtgcttgcag gccccctggc tgtctcgctg ttgctgccca gcctcacact gctggtgtcc 361 cacctctcca gctcccagga tgtctccagt gagcccagca gtgagcagca gctgtgcgcc 421 cttagcaagc accccaccgt ggcctttgaa gacctgcagc cgtgggtctc taacttcacc 481 taccctggag cccgggattt ctcccagctg gctttggacc cctccgggaa ccagctcatc 541 gtgggagcca ggaactacct cttcagactc agccttgcca atgtctctct tcttcaggcc 601 acagagtggg cctccagtga ggacacgcgc cgctcctgcc aaagcaaagg gaagactgag 661 gaggagtgtc agaactacgt gcgagtcctg atcgtcgccg gccggaaggt gttcatgtgt 721 ggaaccaatg ccttttcccc catgtgcacc agcagacagg tggggaacct cagccggact 781 attgagaaga tcaatggtgt ggcccgctgc ccctatgacc cacgccacaa ctccacagct 841 gtcatctcct cccaggggga gctctatgca gccacggtca tcgacttctc aggtcgggac 901 cctgccatct accgcagcct gggcagtggg ccaccgcttc gcactgccca atataactcc 961 aagtggctta atgagccaaa cttcgtggca gcctatgata ttgggctgtt tgcatacttc 1021 ttcctgcggg agaacgcagt ggagcacgac tgtggacgca ccgtgtactc tcgcgtggcc 1081 cgcgtgtgca agaatgacgt ggggggccga ttcctgctgg aggacacatg gaccacattc 1141 atgaaggccc ggctcaactg ctcccgcccg ggcgaggtcc ccttctacta taacgagctg 1201 cagagtgcct tccacttgcc ggagcaggac ctcatctatg gagttttcac aaccaacgta 1261 aacagcatcg cggcttctgc tgtctgcgcc ttcaacctca gtgctatctc ccaggctttc 1321 aatggcccat ttcgctacca ggagaacccc agggctgcct ggctccccat agccaacccc 1381 atccccaatt tccagtgtgg caccctgcct gagaccggtc ccaacgagaa cctgacggag 1441 cgcagcctgc aggacgcgca gcgcctcttc ctgatgagcg aggccgtgca gccggtgaca 1501 cccgagccct gtgtcaccca ggacagcgtg cgcttctcac acctcgtggt ggacctggtg 1561 caggctaaag acacgctcta ccatgtactc tacattggca ccgagtcggg caccatcctg 1621 aaggcgctgt ccacggcgag ccgcagcctc cacggctgct acctggagga gctgcacgtg 1681 ctgccccccg ggcgccgcga gcccctgcgc agcctgcgca tcctgcacag cgcccgcgcg 1741 ctcttcgtgg ggctgagaga cggcgtcctg cgggtcccac tggagaggtg cgccgcctac 1801 cgcagccagg gggcatgcct gggggcccgg gacccgtact gtggctggga cgggaagcag 1861 caacgttgca gcacactcga ggacagctcc aacatgagcc tctggaccca gaacatcacc 1921 gcctgtcctg tgcggaatgt gacacgggat gggggcttcg gcccatggtc accatggcaa 1981 ccatgtgagc acttggatgg ggacaactca ggctcttgcc tgtgtcgagc tcgatcctgt 2041 gattcccctc gaccccgctg tgggggcctt gactgcctgg ggccagccat ccacatcgcc 2101 aactgctcca ggaatggggc gtggaccccg tggtcatcgt gggcgctgtg cagcacgtcc 2161 tgtggcatcg gcttccaggt ccgccagcga agttgcagca accctgctcc ccgccacggg 2221 ggccgcatct gcgtgggcaa gagccgggag gaacggttct gtaatgagaa cacgccttgc 2281 ccggtgccca tcttctgggc ttcctggggc tcctggagca agtgcagcag caactgtgga 2341 gggggcacgc agtcgcggcg tcgggcctgc gagaacggca actcctgcct gggctgcggc 2401 gtggagttca agacgtgcaa ccccgagggc tgccccgaag tgcggcgcaa caccccctgg 2461 acgccgtggc tgcccgtgaa cgtgacgcag ggcggggcac ggcaggagca gcggttccgc 2521 ttcacctgcc gcgcgcccct tgcagacccg cacggcctgc agttcggcag gagaaggacc 2581 gagacgagga cctgtcccgc ggacggctcc ggctcctgcg acaccgacgc cctggtggag 2641 gtcctcctgc gcagcgggag cacctccccg cacacggtga gcgggggctg ggccgcctgg 2701 ggcccgtggt cgtcctgctc ccgggactgc gagctgggct tccgcgtccg caagagaacg 2761 tgcactaacc cggagccccg caacgggggc ctgccctgcg tgggcgatgc cgccgagtac 2821 caggactgca acccccaggc ttgcccaggt gaggacatct gtctcgggct gcacacggag 2881 gaggcactat gtgccacaca ggcctgccca gaaggctggt cgccctggtc tgagtggagt 2941 aagtgcactg acgacggagc ccagagccga agccggcact gtgaggagct cctcccaggg 3001 tccagcgcct gtgctggaaa cagcagccag agccgcccct gcccctacag cgagattccc 3061 gtcatcctgc cagcctccag catggaggag gccaccgact gtgcagggtt caatctcatc 3121 cacttggtgg ccacgggcat ctcctgcttc ttgggctctg ggctcctgac cctagcagtg 3181 tacctgtctt gccagcactg ccagcgtcag tcccaggagt ccacactggt ccatcctgcc 3241 acccccaacc atttgcacta caagggcgga ggcaccccga agaatgaaaa gtacacaccc 3301 atggaattca agaccctgaa caagaataac ttgatccctg atgacagagc caacttctac 3361 ccattgcagc agaccaatgt gtacacgact acttactacc caagccccct gaacaaacac 3421 agcttccggc ccgaggcctc acctggacaa cggtgcttcc ccaacagctg ataccgccgt 3481 cctggggact tgggcctctg tgcctctatg gagactatct tccagttgct gctcaacaga 3541 gttgttggct g //