LOCUS AK294353 2386 bp mRNA linear HUM 21-JAN-2009
DEFINITION Homo sapiens cDNA FLJ50134 partial cds, highly similar to Homo
sapiens glutamate receptor, ionotropic, kainate 1 (GRIK1),
transcript variant 2, mRNA.
ACCESSION AK294353
VERSION AK294353.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2386)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project focused on splicing variants
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2386
/clone="BRAMY2037965"
/clone_lib="BRAMY2"
/db_xref="H-InvDB:HIT000488977"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="amygdala"
CDS 143..>2386
/codon_start=1
/note="highly similar to Homo sapiens glutamate receptor,
ionotropic, kainate 1 (GRIK1), transcript variant 2, mRNA"
/protein_id="BAH11742.1"
/transl_table=1
/translation="MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIACDQL
ALGVAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYINLYPDYAAIS
RAILDLVLYYNWKTVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQLPSGNKDAKPLL
KEMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALDLELYRYSG
VNMTGFRLLNIDNPHVSSIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA
IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDL
DIISLKEEGTEKIGIWNSNSGLNMTDSNKDKSSNITDSLANRTLIVTTILRADLAVAP
LTITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGV
SCVLFVIARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALS
TRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGST
MTFFKKSKISTYEKMWAFMSSRQQTAPVRNSDEGIQRVLTTDYALLMESTSIEYVTQR
NCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPE
EGNKEASALGVENIGGIFIVLAAGLVLSVFVAIGEFIYKSRKNNDIEQCLSFNAIMEE
LGISLKNQ"
BASE COUNT 631 a 594 c 587 g 574 t
ORIGIN
1 gagctcgctc cgtggggagc gcgcagcgtg cttggaaccg gagcatccag agaggatgag
61 gcggggaccc ggcccaagtt gggtgcatct ctcgggcgtc cggcagcggc tgtatctcgg
121 catgaattaa gaagctagga agatggagca cggcacactc ctcgcccagc ccgggctctg
181 gaccagggac accagctggg cactcctcta tttcctctgc tatatcctcc ctcagaccgc
241 cccgcaagta ctcaggatcg catgtgacca gctggctctt ggtgtggctg ctctctttgg
301 cccttcccat agctcctccg tcagtgctgt gcagtctatt tgcaatgctc tcgaagttcc
361 acacatacag acccgctgga aacacccctc ggtggacaac aaagatttgt tttacatcaa
421 cctttaccca gattatgcag ctatcagcag ggcgatcctg gatctggtcc tctattacaa
481 ctggaaaaca gtgacagtgg tgtatgaaga cagcacaggt ctaattcgtc tacaagagct
541 catcaaagct ccctccagat ataatattaa aatcaaaatc cgccagctgc cctctgggaa
601 taaagatgcc aagcctttac tcaaggagat gaagaaaggc aaggagttct atgtgatatt
661 tgattgttca catgaaacag ccgctgaaat ccttaagcag attctgttca tgggcatgat
721 gaccgagtac tatcactact ttttcacaac cctggactta tttgctttgg atctggaact
781 ctataggtac agtggcgtaa acatgaccgg gtttcggctg cttaacattg acaaccctca
841 cgtgtcatcc atcattgaga agtggtccat ggagagactg caggccccac ccaggcccga
901 gactggcctt ttggatggca tgatgacaac tgaagcggct ctgatgtacg atgctgtgta
961 catggtggcc attgcctcgc accgggcatc ccagctgacc gtcagctccc tgcagtgcca
1021 tagacataag ccatggcgcc tcggacccag atttatgaac ctgatcaaag aggcccggtg
1081 ggatggcttg actgggcata tcacctttaa taaaaccaat ggcttgagga aggattttga
1141 tctggacatt attagtctca aagaggaagg aactgaaaag attgggattt ggaattccaa
1201 cagtgggctt aacatgacgg acagcaacaa agacaagtcc agcaatatca ctgattcatt
1261 ggccaacaga acactcattg tcaccaccat tctgagggct gacctggcag tggctcctct
1321 taccatcacc tacgtgcggg agaaagtcat tgacttctcc aaacccttca tgaccctagg
1381 catcagcatt ctctaccgga agcccaatgg taccaatcca ggcgttttct ccttcctcaa
1441 ccccctgtct ccagatattt ggatgtatgt gctcttagcc tgcttgggag tcagctgtgt
1501 actctttgtg attgcaaggt ttacacccta cgagtggtat aacccccacc catgcaaccc
1561 tgactcagac gtggtggaaa acaattttac tttactaaat agtttctggt ttggagttgg
1621 agctctcatg cggcaaggat cagagctgat gcccaaagct ctatcgacca gaatagttgg
1681 agggatatgg tggtttttca ccctaatcat catttcatcc tacacggcca atctggctgc
1741 cttcttgaca gtagagagaa tggaatcccc catagattcg gcagatgatc tggcaaagca
1801 aaccaagata gaatatgggg cggttagaga tggatcaaca atgaccttct tcaagaaatc
1861 aaaaatctcc acctatgaga agatgtgggc tttcatgagc agcaggcagc agaccgcccc
1921 ggtaagaaac agtgatgagg ggatccagag agtgctcacc acagactacg cgctgctgat
1981 ggagtccacc agcattgagt atgtgacgca gagaaactgc aacctcactc agatcggggg
2041 cctcattgac tccaaaggtt acggagtggg aacacctatt ggttctcctt accgggataa
2101 aattactatt gctattcttc aactccaaga agaagggaag ctgcatatga tgaaagagaa
2161 gtggtggcgt gggaatggct gccccgagga aggcaacaaa gaagccagtg ccctgggagt
2221 ggaaaatatt ggaggcatct tcattgttct ggctgccgga ctggtccttt ctgtatttgt
2281 agctattgga gaattcatat acaaatcacg gaagaataat gatattgaac agtgtctctc
2341 tttcaacgct atcatggaag aactgggaat ctcactgaag aatcag
//