LOCUS AK293772 3022 bp mRNA linear HUM 24-JUL-2008 DEFINITION Homo sapiens cDNA FLJ61218 complete cds, highly similar to RRP5 protein homolog. ACCESSION AK293772 VERSION AK293772.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3022) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project focused on splicing variants JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..3022 /clone="BRACE3006842" /clone_lib="BRACE3" /db_xref="H-InvDB:HIT000488396" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="cerebellum" CDS 117..2432 /codon_start=1 /note="highly similar to RRP5 protein homolog" /protein_id="BAG57188.1" /transl_table=1 /translation="MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKR KKSQKGPAKTKKLKIEKRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISL PNGLQGFVQVTEICDAYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITD RGKKSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLL KAQEYIRQKNKGAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLN NLLPGLVVKAQVQKVTPFGLTLNFLTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCV HPRTRVVHLSLRPIFLQPGRPLTRLSCQNLGAVLDDVPVQGFFKKAGATFRLKDGVLA YARLSHLSDSKNVFNPEAFKPGNTHKCRIIDYSQMDELALLSLRTSIIEAQYLRYHDI EPGAVVKGTVLTIKSYGMLVKVGEQMRGLVPPMHLADILMKNPEKKYHIGDEVKCRVL LCDPEAKKLMMTLKKTLIESKLPVITCYADAKPGLQTHGFIIRVKDYGCIVKFYNNVQ GLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCEPSKERMLLSFKLSSDPEPKKEPAG HSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNIRAFLPTSHLSDHVANGPLLHHW LQAGDILHRVLCLSQSEGRVLLRRKPALVSTVEGGQDPKNFSEIHPGMLLIGFVKSIK DYGVFIQFPSGLSGLAPKAIMCSSCRSRPLD" BASE COUNT 802 a 744 c 775 g 701 t ORIGIN 1 acacttccgg aagaattgca ctggactgtg ggtatcctgg tctccgcgtg tgtgagtacc 61 gcggcgcgag gttagtggta gctgggtgca gacgccgtgg cgctggagac ccaaacatgg 121 caaacctgga agaaagcttc ccccgaggag gtacaagaaa gatccacaaa ccagagaaag 181 ctttccagca gtcagttgaa caagacaact tatttgatat ttctactgaa gagggatcca 241 ccaaaagaaa aaagagccag aaggggccag caaaaacaaa aaagttgaaa atcgaaaaga 301 gagaaagcag caagtccgca agagagaagt ttgaaatcct tagtgttgag tccctgtgtg 361 agggaatgcg tattttgggt tgcgtgaaag aggtgaatga actggaactg gtgattagtc 421 tccccaatgg cctccagggc tttgtgcaag tcactgaaat ctgtgatgcc tacaccaaaa 481 agctgaatga gcaggtgaca caagaacaac ctctgaagga cctacttcac ttgcctgaac 541 ttttctcacc tggaatgctg gtaagatgtg tggtgagcag tctgggcatc acagacaggg 601 gcaagaagag tgtcaagctg tctctgaacc ccaaaaatgt caacagagtg ctgagtgctg 661 aggccctgaa gcctggcatg ctacttacag gtaccgtatc cagcctggaa gaccatggct 721 acctagtgga cattggtgtt gatgggacca gagcttttct gccactgctg aaagcccagg 781 agtacatcag acagaagaac aaaggtgcta aactaaaggt gggtcagtac ctgaactgca 841 ttgttgaaaa ggtgaaaggc aacggaggag ttgttagtct gtctgttggt cactcagagg 901 tttctacggc cattgctact gaacagcaga gctggaacct taataacttg ctaccaggac 961 tggtggtcaa agctcaggta cagaaggtga ctccatttgg ccttacgcta aacttcctca 1021 cattcttcac gggcgtggtt gactttatgc acctggatcc caagaaagct ggaacatatt 1081 tctcaaatca ggcagtgagg gcctgcatcc tttgcgtcca tcctcgaacc agagttgtgc 1141 acctgagcct gcgccccatc ttcctacagc ctggacgccc actcacccga ctctcttgcc 1201 agaaccttgg agcagtgctg gatgatgttc ctgtccaggg ttttttcaaa aaggctgggg 1261 ccacctttag gctgaaggat ggggttctgg cctatgcccg gctcagccat ctctctgatt 1321 ctaagaacgt cttcaatcct gaggccttca agccagggaa cactcacaag tgtagaatta 1381 ttgactacag ccaaatggat gaactggcct tgctctctct acgaacgtct attattgaag 1441 ctcagtacct tagatatcat gacatcgaac ctggggcagt ggtaaagggc acagtgctaa 1501 ccataaagtc atatgggatg ctggtgaagg tgggcgagca gatgaggggc ctggtacctc 1561 ccatgcacct ggctgacatc ctgatgaaga atccggagaa gaagtaccac atcggggatg 1621 aggtcaagtg ccgggttttg ctttgtgacc ctgaagccaa gaagctgatg atgaccctga 1681 aaaaaaccct gattgagtcc aaactacctg tcattacctg ctatgccgat gccaagcctg 1741 gtctgcagac acatggcttc atcatcaggg tcaaggacta tggctgcatt gtgaagttct 1801 acaacaatgt gcagggactg gtgcccaagc atgagctcag tactgagtat atccctgacc 1861 cggagagagt tttttacact ggccaggtgg tgaaggttgt cgtattgaac tgtgagccat 1921 ccaaagagag gatgctctta tccttcaagc tgtcgagtga tccagagcca aagaaagagc 1981 ctgcaggaca cagtcagaag aaaggaaaag ccattaacat tgggcagttg gtagatgtga 2041 aggttttaga gaagaccaaa gatgggctgg aggtggctgt cctgccccac aacatccgtg 2101 ctttcctccc cacatctcat ctgtcggacc acgttgccaa cggcccattg ttacatcatt 2161 ggctccaggc aggtgacatc cttcaccgag tcctgtgtct gagccagagc gaggggcgtg 2221 ttcttcttcg caggaagcca gccttggtct ccacagtaga aggtggccag gatcccaaga 2281 acttctcaga aatccatcct ggaatgttgc tcattggttt tgtgaagagc atcaaggact 2341 atggcgtgtt catccagttc ccctcaggtc ttagcggact ggccccaaaa gctatcatgt 2401 gctcgagctg caggtcgcgg ccgctagact agtctagaga aaaaacctcc cacacctccc 2461 cctgaacctg aaacataaaa tgaatgcaat tgttgttgtt aacttgttta ttgcagctta 2521 taatggttac aaataaagca atagcatcac aaatttcaca aataaagcat ttttttcact 2581 gcattctagt tgtggtttgt ccaaactcat caatgtatct tatcatgtct ggatccccgg 2641 gtaccgagct cgaattaatt cctcttccgc ttcctcgctc actgactcgc tgcgctcggt 2701 cgttcggctg cggcgagcgg tatcagctca ctcaaaggcg gtaatacggt tatccacaga 2761 atcaggggat aacgcaggaa agaacatgtg agcaaaaggc cagcaaaagg ccaggaaccg 2821 taaaaaggcc gcgttgctgg cgtttttcca taggctccgc ccccctgacg agcatcacaa 2881 aaatcgacgc tcaagtcaga ggtggcgaaa cccgacagga ctataaagat accaggcgtt 2941 tccccctgga agctccctcg tgcgctctcc tgttccgacc ctgccgctta ccggatacct 3001 gtccgccttt ctcccttcgg ga //