LOCUS AK241191 1560 bp mRNA linear PLN 16-FEB-2008
DEFINITION Oryza sativa Japonica Group cDNA, clone: J065120P10, full insert
sequence.
ACCESSION AK241191
VERSION AK241191.1
KEYWORDS FLI_CDNA; CAP trapper.
SOURCE Oryza sativa Japonica Group (Japanese rice)
ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE 1 (bases 1 to 1560)
AUTHORS Kikuchi,S., Adachi,J., Aizawa,K., Akimura,T., Arakawa,T.,
Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N.,
Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y.,
Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y.,
Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H.,
Kawagashira,N., Kawai,J., Kawamata,M., Kishikawa-Hirozane,T.,
Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y.,
Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T.,
Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T.,
Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M.,
Nagata,T., Nakahama,Y., Nakamura,M., Namiki,T., Narikawa,R.,
Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M.,
Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R.,
Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D.,
Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K.,
Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y.,
Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M.,
Yasunishi,A., Yazaki,J., Yokomizo,S., Yoshimura,A., Eguchi,K.,
Kanamori,H., Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and
Bito,T.
TITLE Direct Submission
JOURNAL Submitted (10-OCT-2006) to the DDBJ/EMBL/GenBank databases.
Contact:Shoshi Kikuchi
National Institute of Agrobiological Sciences, Division of Genome
and Biodiversity Research; 2-1-2 Kannondai, Tsukuba, Ibaraki
305-8602, Japan
REFERENCE 2
AUTHORS Kikuchi,S.
TITLE Oryza sativa full length cDNA
JOURNAL Published Only in Database(2006)
COMMENT This clone is one of the 2.6K full-length cDNA clones from
japonica rice.
URL:http://cdna01.dna.affrc.go.jp/cDNA/
NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.,
Yamamoto,M. and Nakahama,Y.
NIAS STAFF Institute Sequence group: Eguchi,K., Kanamori,H.,
Yamagata,H., Kamiya,K., Kurita,K., Kikuta,A. and Bito,T.
FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
Yoshimura,A., Matsubara,K. and Murakami,K.
Genome Exploration Research Group in Riken Genomic Sciences Center
and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
Yasunishi,A. and Hayashizaki,Y.
FEATURES Location/Qualifiers
source 1..1560
/clone="J065120P10"
/cultivar="Nipponbare"
/db_xref="taxon:39947"
/mol_type="mRNA"
/note="50ppm CuSO4 for 1 week"
/organism="Oryza sativa Japonica Group"
/tissue_type="callus"
BASE COUNT 310 a 431 c 447 g 372 t
ORIGIN
1 aacggttttt tttttttttt tgagttaaaa tcatctttac ttctagagga tacaaatatc
61 atatccccag gcaggtagaa tacatagaaa tatcggagca atgctcaacg ctttgctcag
121 attaagaaat ctcatacaat cataatctgg ttatttagga tataattcaa atcttattcc
181 aggcaccaaa tagtcctgaa aaattttctt cgcctaatag tggtgccgcc ctgcaggaac
241 tctgagaccg ctcttttccc aaatgcagta attgttgccg tgagcaacga catggaagtc
301 tgacgggatt aagttgccca cgtcataccg tgtcccaatc tttgttatga ccttatcatc
361 gatcatggcg acatagacgt ctccctcagc agcaaggatt ttcagcttgc tcccgggatg
421 aatctcattt cttgatctca ctgcagctaa tgtgctgatc tcctgcttca ggttccagtc
481 aaatacatgg tcgtagaaaa tgcagggtac tccagggtgt gtgaggatgt aggcgtagcc
541 ctgcatgacc ttgtcggagg ggaacggcca tgagttctgt gtggagccag tgtcatggtt
601 gtcgatgaag gtgacggcct tctctggcag ccagccaatc atccccggcg ccttgccgtt
661 gccgtccttc atccgccaca gctcaccttg caccgccgcc tgcagctcgc ccttggtcgt
721 gaagtcgaac gctgacgcag ggccaccgac ggcctgcgcc cagttcacca gctcctgccg
781 gtcaccgtcc tggttccacg acggctcacc gttgccgtcg taacgcatgt tgctccatat
841 ctcggcgacg acgaaggacg ggtcggtgtt gtcgacgtac gtcttggcga cggccgccga
901 gtatcccttg gcgaagtcga ggcgccagcc gtcgaagccg acgtcggact tgagccaatt
961 gagccagtcg gacagctctg tctgcacacg cgtgttgagg tggtcgatgt cgggcgccgc
1021 gccgaagtct gcgccggtgt cgcggtgacc gcggccgttg gagtactgcg tgtcgtcgct
1081 gcagatcatg tcggggcccc agtcgaggcg gctgtccggc gtgccaccct cgaaaatgca
1141 gtagatgcca cggctatcct tgtaatccgc gcaccggtgg ttgatgacga tgtcggcgac
1201 gcacttgatg cctttgctgt ggaaggcggc gatcagcgac ctgagctctg cccccgtgcc
1261 gtacttggaa gcgtccaggt cgtagagccg gcccggcatg tatccctgcg gggcgacgga
1321 gtgcgacggc ggtgggagcc agacgtgcgt gacaccggtc gcggcgatgt cgtcgacgtg
1381 gccatggagg aagttgtacc acccgccctg cttcttccac gactcccagt tgaacccctg
1441 gaagaggacc tgggcttggg ccaagtgaga gctcagacag agcaaggcga taaggaggag
1501 gctgctcatt gaggctatgc gctttgccat tgctgcttct ttcgagtagc tgagttgtgt
//