LOCUS AK222905 1423 bp mRNA linear HUM 17-NOV-2007 DEFINITION Homo sapiens mRNA for U5 snRNP-specific protein variant, clone: HRC03173. ACCESSION AK222905 VERSION AK222905.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1423) AUTHORS Suzuki,Y., Sugano,S., Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A. and Yokoyama,S. TITLE Direct Submission JOURNAL Submitted (22-APR-2005) to the DDBJ/EMBL/GenBank databases. Contact:Akiko Tanaka RIKEN Yokohama Institute, Protein Research Group; 1-7-22 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan URL :http://protein.gsc.riken.jp/ REFERENCE 2 AUTHORS Maruyama,K. and Sugano,S. TITLE Oligo-capping : a simple method to replace the cap structure of eucaryotic mRNAs with oligoribonucleotides. JOURNAL Gene 138, 171-174 (1994) REFERENCE 3 AUTHORS Suzuki,Y., Yoshitomo,K., Maruyama,K., Suyama,A. and Sugano,S. TITLE Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library. JOURNAL Gene 200, 149-156 (1997) COMMENT This work was supported in part by the National Project on Protein Structural and Functional Analysis, Ministry of Education, Culture, Sports, Science and Technology of Japan. Sumio Sugano, Yutaka Suzuki Laboratory of Functional Genomics Department of Medical Genome Sciences Graduate School of Frontier Sciences The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639 Japan URL: http://www.k.u-tokyo.ac.jp/index.html.en FEATURES Location/Qualifiers source 1..1423 /cell_type="primary human renal epithelial cells" /clone="HRC03173" /clone_lib="HRC" /db_xref="H-InvDB:HIT000330685" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /note="this clone is also named as hss001001847" /organism="Homo sapiens" /tissue_type="kidney" CDS <1..1198 /codon_start=2 /inference="non-experimental evidence, no additional details recorded" /note="Start codon is not identified." /product="U5 snRNP-specific protein variant" /protein_id="BAD96625.1" /translation="LILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEV QLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQL TATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTSHIYVSSDDI KETGYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQ TVHLPGQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTII ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFF MVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSAD REDLYA" BASE COUNT 405 a 406 c 326 g 286 t ORIGIN 1 cctgattctg cgtgccctac atgtgaacaa cgatcgggca aaagtgatcc tgaagccaga 61 caagactact attacagaac cacaccacat ctggcccact ctgactgacg aagaatggat 121 caaggtcgag gtgcagctca aggatctgat cttggctgac tacggcaaga aaaacaatgt 181 gaacgtggca tcactgacac aatcagaaat tcgagacatc atcctgggta tggagatctc 241 ggcaccgtca cagcagcggc agcagatcgc tgagatcgag aagcagacca aggaacaatc 301 gcagctgacg gcaacacaga ctcgcactgt caacaagcat ggcgatgaga tcatcacctc 361 caccaccagc aactatgaga cccagacttt ctcatccaag actgagtgga gggtcagggc 421 catctctgct gccaacctgc acctaaggac cagtcacatc tatgtttcat ctgacgacat 481 caaggagact ggctacacct acatccttcc caagaatgtg cttaagaagt tcatctgcat 541 atctgacctt cgggcccaaa ttgcaggata cctatatggg gtgagcccac cagataaccc 601 ccaggtgaag gagatccgct gcattgtgat ggtgccgcag tggggcactc accagaccgt 661 gcacctgcct ggccagctgc cccagcatga gtacctcaag gagatggaac ccttaggttg 721 gatccacact cagcccaatg agtccccgca gttatcaccc caggatgtca ccacccatgc 781 caagatcatg gctgacaacc catcttggga tggcgagaag accattatca tcacatgcag 841 cttcacgcca ggctcctgta cactgacggc ctacaagctg acccccagtg gctacgaatg 901 gggccgccag aacacagaca agggcaacaa ccccaagggc tacctgcctt cacactatga 961 gagggtgcag atgctgctgt cggaccgttt ccttggcttc ttcatggtcc ctgcccagtc 1021 ctcgtggaac tacaacttca tgggtgttcg gcatgacccc aacatgaaat atgagctaca 1081 gctggcgaac cccaaagagt tctaccacga ggtgcacagg ccctctcact tcctcaactt 1141 tgctctcctg caggaggggg aggtttactc tgcggatcgg gaggacctgt atgcctgacc 1201 gtttccctgc ctcctgctcc agcctcccga ggccgaagcc tcagcccctc cagacaggcc 1261 gctgacattc agcagtttgg cctctttccc tctgtctgtg cttgtgttgt tgacctcctg 1321 atggcttgtc atcctgaata aaatataata ataaattttg tataaatagg aaaaaaaaaa 1381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa //