LOCUS AK099707 1624 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013075K17, full insert sequence. ACCESSION AK099707 VERSION AK099707.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1624) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1624 /clone="J013075K17" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1624 /db_xref="Osa1:LOC_Os03g49510" /note="(Rice Genome Annotation Project) phosphatidylinositol-4-phosphate 5-kinase 1 precursor, putative, expressed" /note="mapping to R03-TIGRv4S1-001313F (Chr.3: short arm=28132324, long arm=28135122, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 480 a 285 c 343 g 516 t ORIGIN 1 catatcgatg ctgcagatta catgatgtct atatgtggtg gtgatagtct aaaggagctt 61 tcttcacctg ggaaaagtgg cagcattttc tatctttctc aagatgaacg ttttgttata 121 aaaacattga ggaaaactga gctgaagatt ggtttgatgt aatacgtgct gcagatacta 181 ttgaagatgc ttccaaagta ttacaatcat gtcaaagctt atgataatac gctcattaca 241 aaattctttg gcgtgcacag gattactctg aaacctggaa gaaaggtccg ttttgttgtc 301 atgggaaata tgttttgtac tgaactgcga attcatcgta agtatgactt aaagggctct 361 acacaaggcc gatcaacaaa gaagcaaaat ataaatgaga acacaacact aaaggacctt 421 gacctatcat atgtttttca cgtggataaa ccatggaggg aggcactttt caggcaaatt 481 gctactttct tgctcctctt tttttctgaa catcttactg tcgtctttca tggttttgtc 541 tatattggct tgaagtccag gttccataac ttaccgttta tgatgttact tctggagatt 601 gtgttcactg ggtagtccct tctggaaaat taaaaagaac agtagattta aatgacttgt 661 gcagattcct gcttcagtcc catgattggt ggacatcaaa attattttct actattttga 721 tattgattct tatcctattc ttgagatctg aagaatactt aagatggaca atttttattt 781 atactatagc aataaataga tttttttaaa tataaacaac tagattaaag aggcaaacca 841 gattttaagc agtgtccgac catgcataca agagattgaa ttccagctgt ctagttcagt 901 tttgcatatt actgctccat ttctgctgtg ctatttttct taacatggtt gacgatgata 961 tcttgagagc caacagttgt actattttca ggcagatagc tcttgattgt atgttcctgg 1021 aatcccaatc tataattgac tatagcatgc tattgggaat ccatttccga gctcccaatc 1081 acctgaagcg tatcacatca tgtcagaacg ctcttgaaag tactggaatt tcagctgaaa 1141 cggaatgtag tgttgcactg catcatgagg agacaatttc ttcaaaggga tttctactag 1201 ttgctgctga tgagccaggt ccagcagtac gtggttcgca cataagagga agcatggtta 1261 gggcagcaga aggtggttat gaagaagttg atcttgtttt gccaggcact ggaaggttcc 1321 gtgttcagct aggggtgaat atgccagctc gagctcggaa agtgcaagag gacgtgaacg 1381 tagaagtaga aaacagggac accattgaag agtatgatgt tgtcctatac cttggtatca 1441 tcgacatact acaagagtat aatgtgtcca aaagagttga gcatgctgtc aaatcactaa 1501 aattcgaccc tctttcgata tcagctgttg atccaaattt gtattcgaga cgatttataa 1561 gtttcttgga gaaggttttc cccgagcaag attgaacagt aaatagatat tgcaagtttc 1621 ttgg //