LOCUS AK094158 2117 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ36839 fis, clone ASTRO2011437, highly similar
to Mus musculus SMAR1 mRNA.
ACCESSION AK094158
VERSION AK094158.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2117)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..2117
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO2011437"
/clone_lib="ASTRO2"
/db_xref="H-InvDB:HIT000019013"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
CDS 145..1782
/codon_start=1
/protein_id="BAC04296.1"
/translation="MTDVTKSQPHCELNSFVLTGHSPVLWMMSEHDLADVVQIAVEDL
SPDHPVVLENHVVTDEDEPALKRQRLEINCQDPSIKTICLRLDSIEAKLQALEATCKS
LEEKLDLVTNKQHSPIQVPMVAGSPLGATQTCNKVRCVVPQTTVILNNDRQNAIVAKM
EDPLSNRAPDSLENVISNAVPGRRQNTIVVKVPGQEDSHHEDGESGSEASDSVSSCGQ
AGSQSIGSNVTLITLNSEEDYPNGTWLGDENNPEMRVRCAIIPSDMLHISTNCRTAEK
MALTLLDYLFHREVQAVSNLSGQGKHGKKQLDPLTIYGIRCHLFYKFGITESDWYRIK
QSIDSKCRTAWRRKQRGQSLAVKSFSRRTPNSSSYCPSEPMMSTPPPASELPQPQPQP
QALHYALANAQQVQIHQIGEDGQVQVGHLHIAQVPQGEQVQITQDSEGNLQIHHVGQD
GQLLEATRIPCLLAPSVFKASSGQVLQGAQLIAVASSDPAAAGVDGSPLQGSDIQVQY
VQLAPVSDHTAGAQTAEALQPTLQPEMQLEHGAIQIQ"
BASE COUNT 473 a 658 c 611 g 375 t
ORIGIN
1 ctttctcagc ctccttagta gctgggatta caggcatgtg ccaccatacc ctgctaattt
61 tcgtattttt agtagagatg gggtttcgcc acattggcca ggctgacagg tgatccaccc
121 gccttggcct tccaaagtgc tgggatgaca gatgtgacca aaagccagcc ccactgtgag
181 ttgaactctt tcgtgttgac cggccactct cctgtgctct ggatgatgtc ggaacacgac
241 ctggccgatg tggttcagat tgcagtggaa gacctgagcc ctgaccaccc agttgttttg
301 gagaatcatg tagtgacaga tgaagacgaa cctgctttga aacgccagcg actagaaatc
361 aattgccagg atccatctat aaagacaatc tgcttgcggt tggatagcat tgaagccaaa
421 ttgcaagccc tggaggctac ttgtaaatcc ttagaagaaa agctggatct ggtcacgaac
481 aagcagcaca gccccatcca ggttcccatg gtggccggct cccctctcgg ggcaacccag
541 acgtgcaaca aagtgcgatg cgtcgtcccc cagactacag taatactcaa caatgatcgg
601 cagaacgcca ttgtagccaa gatggaagac cccttgagca acagggcacc ggattccctg
661 gaaaatgtca ttagcaacgc tgtgcctggg cgtcggcaga acaccattgt ggtgaaggtg
721 ccgggccaag aagacagcca ccacgaggac ggggagagcg gctcggaggc cagcgactct
781 gtgtccagct gtgggcaggc gggcagtcag agcatcggga gcaacgtcac gctcatcacc
841 ctgaactcgg aagaggacta ccccaatggc acctggctgg gcgacgagaa caaccccgag
901 atgcgggtac gctgcgccat catcccctcc gacatgctgc acatcagcac caactgccgc
961 acggccgaga agatggcgct aacgctgctg gactacctct tccaccgcga ggtgcaggct
1021 gtgtccaacc tctcggggca gggcaagcac gggaagaagc agctggaccc gctcaccatc
1081 tacggcatcc ggtgtcacct tttctataaa tttggcatca cagaatccga ctggtaccga
1141 atcaagcaga gcatcgactc caagtgccgc acggcgtggc ggcgcaagca gcggggccag
1201 agcctggcgg tcaagagctt ctcgcggaga acgcccaact cgtcctccta ctgcccttca
1261 gagccgatga tgagcacccc acctcctgcc agcgagctcc cgcagccaca gccgcagccg
1321 caggccctgc actacgcgct ggccaacgca cagcaggtgc agatccacca gatcggagaa
1381 gacggacagg tgcaagtagg acacctccac atcgcccagg tgccgcaggg ggagcaagtc
1441 cagatcacgc aggacagcga gggcaacctc cagatccatc acgtggggca ggacggtcag
1501 cttctagagg ccacccgcat cccctgcctc ctggccccat ccgtcttcaa agccagcagt
1561 ggccaggtgc tgcagggtgc acagctgatc gccgtggcct cctcggaccc cgcggcagcg
1621 ggcgtggatg ggtcgccact ccagggcagc gacatccagg ttcagtacgt gcagctggcg
1681 ccagtgagtg accacacggc cggggcacag acggccgaag ccctgcagcc cacgctacag
1741 ccggagatgc agctcgagca cggggccatc cagattcagt gagcggtgcc catggcacca
1801 ggagcccctc gccggctccg cctacggccc ggcccccacg cgccctgctc tcacggcctc
1861 ggcacaggca gcggctgcac gtgttctgct gaagtgcgtc tgaaggccgc tgcctccgcg
1921 gggaacagca tcctatcaac tgaaagagca gccgccgccg cccccagccg gagacccctt
1981 tcgtttgagt cctgctgttg gtgtcggagc acgaggggag gcacggtgcg gagagcgtcg
2041 catatgcgcg ggaaatcagg aactatgata tttttctgtt taaacagctt tttttaattt
2101 gctatggtgt ttataac
//