LOCUS AK092236 3969 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ34917 fis, clone NT2RP7002028.
ACCESSION AK092236
VERSION AK092236.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3969)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Tashiro,H., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: HRI and RAB; annotation: HRI and RAB.
FEATURES Location/Qualifiers
source 1..3969
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RP7002028"
/clone_lib="NT2RP7"
/db_xref="H-InvDB:HIT000017103"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells after
5-weeks retinoic acid (RA) induction."
/organism="Homo sapiens"
CDS 250..2133
/codon_start=1
/protein_id="BAC03834.1"
/translation="MAEAALVNTPQGHVTFEDIAVYFSQEEWGLLDEAQRCLYHDVML
ENFSLMASVGCLHGIEAEEAPSEQTLPAQGVSQARTPKLGPSIPNAHSCEMCILVMKD
ILYLSEHQGTLPWQKPYTSVASGKWFSFGSNLQQHQNQDSGEKHIRKEESSALLLNSC
KIPLSDNLFPCKDVEKDFPTILGLLQHQTTHSRQEYAHRSRETFQQRRYKCEQVFNEK
VHVTEHQRVHTGEKAYKRREYGKSLNSKYLFVEHQRTHNAEKPYVCNICGKSFLHKQT
LVGHQQRIHTRERSYVCIECGKSLSSKYSLVEHQRTHNGEKPYVCNVCGKSFRHKQTF
VGHQQRIHTGERPYVCMECGKSFIHSYDRIRHQRVHTGEGAYQCSECGKSFIYKQSLL
DHHRIHTGERPYECKECGKAFIHKKRLLEHQRIHTGEKPYVCIICGKSFIRSSDYMRH
QRIHTGERAYECSDCGKAFISKQTLLKHHKIHTRERPYECSECGKGFYLEVKLLQHQR
IHTREQLCECNECGKVFSHQKRLLEHQKVHTGEKPCECSECGKCFRHRTSLIQHQKVH
SGERPYNCTACEKAFIYKNKLVEHQRIHTGEKPYECGKCGKAFNKRYSLVRHQKVHIT
EEP"
BASE COUNT 1103 a 861 c 956 g 1049 t
ORIGIN
1 agaatcttcc ggcgtctttc cggtggtggt cgtttttgct gcctgcgagc gcgtccgcgg
61 gctgggcgtt tccggctcgc tgggtccggg ccaggtaact ggagccggaa accggtggag
121 gtggtgtccg cccgcagagg agcttgcctg gtctcggtct gagcgtcgcc cagcgatttg
181 ccaccgcacg cacgccggat cccgggcttt accgcccgcc tttccaggcc ccgccccgcc
241 taaagtccca tggccgaggc agcgctagtg aatacgccgc agggccatgt gacctttgag
301 gatattgctg tgtacttctc ccaggaggag tggggcctcc ttgatgaagc tcaaaggtgc
361 ctgtatcatg atgtgatgct ggagaacttt tcgcttatgg cctcagtagg ttgtttgcat
421 ggaatagagg ctgaggaggc cccttctgag cagactcttc ctgcgcaagg agtgtcacag
481 gccaggactc caaagctagg tccttccatc ccaaatgctc attcttgtga gatgtgtatc
541 ctggtcatga aagacatttt gtacctcagt gagcatcagg ggacacttcc ctggcagaaa
601 ccttatacgt ctgtggccag tgggaaatgg ttttcatttg gttctaacct gcaacagcac
661 cagaaccagg acagtggaga gaaacacatc agaaaggagg agagcagtgc cttgcttctg
721 aatagctgca aaattcctct gtcagacaat cttttcccat gcaaagatgt tgagaaggat
781 tttccaacca tcctgggcct tctccaacac cagaccaccc acagcagaca agagtatgca
841 catagaagca gggagacctt tcaacaaaga cgttacaaat gtgagcaagt tttcaatgag
901 aaagttcatg ttactgagca tcagagagtc cacactggag aaaaagctta taagcgtagg
961 gaatatggga aatccttgaa ctctaaatac ttatttgttg aacaccagag aacccataat
1021 gcagaaaagc cttatgtgtg caatatatgt gggaaatcat tcctccataa acaaacactc
1081 gttgggcacc agcagagaat tcacactaga gaaaggtctt atgtgtgcat cgaatgtggg
1141 aaatccttga gctccaaata ctcacttgtg gaacaccaga gaacccataa tggagaaaag
1201 ccttatgtgt gcaatgtatg tgggaaatca ttccgccaca aacaaacatt tgttggccat
1261 cagcagagaa tccacactgg agagaggcct tatgtgtgta tggaatgtgg gaaatctttt
1321 attcattcct atgaccgcat tcgacaccag agagttcaca ctggagaagg ggcttatcag
1381 tgcagtgaat gtgggaaatc cttcatatac aaacagtcac ttcttgatca ccatagaatc
1441 cacacgggag aaaggcctta tgagtgcaaa gaatgtggga aggccttcat tcacaaaaaa
1501 agacttcttg agcaccagag aattcatact ggagaaaagc cttatgtgtg catcatatgt
1561 gggaaatcat ttatccgctc gtctgactac atgcgacacc agagaattca cactggagaa
1621 agggcttatg aatgcagtga ctgtgggaaa gccttcatct ccaaacaaac acttcttaag
1681 catcacaaaa tccacactag agaaaggcct tatgaatgca gtgaatgtgg aaaaggcttc
1741 taccttgagg ttaaacttct tcagcaccaa agaatccata ctagagaaca actttgtgag
1801 tgcaatgaat gtggaaaagt cttcagccac caaaaaagac ttcttgagca ccagaaagtt
1861 cacactggcg aaaagccctg tgagtgcagt gaatgtggga aatgctttag acaccgcacc
1921 agcctcattc aacaccagaa agttcacagt ggagagaggc cttataactg cactgcatgt
1981 gagaaggcct ttatctataa aaacaaactt gttgagcatc agcgaatcca caccggagaa
2041 aagccgtatg aatgtggtaa atgtgggaaa gccttcaaca aaagatattc ccttgtcagg
2101 caccagaagg tacatataac agaagagccc tagcaattgt tgggatgtgt aattgtctta
2161 ttcactgtag gacaccagag agctgatttt tcaagggatc caacagacag aaattcaccc
2221 tcatacatct gcatatcact agttgaaaga ttcactacaa ggtccaagta cttgggaagc
2281 tttctagaga ttacttgtac tttctaatct gcccagtgtt acaacagaca ctaccatgtg
2341 gcatatcctc accgttttca tcagtcactc acatgtgctc aaggaatgca gaccactgtg
2401 cttaccaaat tctgaaggga ataatataat aaaagcctgt tgagggtcct cttccatctt
2461 gctgaactgt tcgaggcaaa gacaaaaccc aactttgacc aagaagagca atctggattc
2521 ttgtagccca tggaggttta ccttcttcat aggttttttt tttttttatg tgattgccat
2581 agtgggatat tccctctccc acattaccca agagggaaat gggctgtctt accatgtgct
2641 gatgtatgtg ctctgccagt gtgaagggtg aacagctcca actttatgtc cccccaggga
2701 catagtatga gatcggaaaa tagttcttag tcctgtttgt cttaattttt attggtttcc
2761 aaggtctcct aggaaggaga gcagagctgt gtggtcctaa tcatggtgtt gatgccagat
2821 ttatttgtag gtccagaggt ctccctgaga agaggcattt gtgacaaact caagtgctgg
2881 gacctgcatg aattgtttat ttgcagtgat gcttcatatt tcccagcact gttcatggta
2941 tcttatttcc caggtccttc attgtagcca tgggcactga aggactgaat tggtaggtag
3001 gtcactggtt gtaagaccta ctggggccag gtaagaacag taattggccc agacaggtag
3061 gtgtgataaa cagagtagaa aagattgtgg ccaagaagag tgaatgtgtc ccatccaaag
3121 gtgcatccag atatgtctgt gttactatgg cttcatggtt tgggggtata tagaaattct
3181 caggacctca gacctttgat tctcctttag caacacacat cgtcagcata aggcatctaa
3241 agattttgtg gactcataac ttatgtactg tttttgagat gattgctgca cgggcaggaa
3301 agcaggattt gagagaacat acaccttgcc ttccagatat gtggtttttg tgattcaccc
3361 agatctgttg tgccagttag gaattatctt tattacttcc cgtttattgc cactgctgag
3421 aaggctgtcc ttcctaactt gtgaggagat gaatccttaa taataagtaa atcttgtgtt
3481 atcctatagt ctggttttcc aaaaggagag gtagatgcat atttttgtgt ggaaccattt
3541 atcttaaaac attgaggtgc agttttcata cacaaaacct tctatctttt taagaactgt
3601 ctgtatggtt tattgcccag ttaatgggtt ttgatagtca tgttatctca gtaagtgtct
3661 tgtcttagaa atatgtgtgt ataggctggg tgcggtggct catgcctgta atcccagcac
3721 tttgggaggc caaggcaggt ggatcacctg aggtcaggag tttgagacca gcctgaccaa
3781 catggtgaaa tccagtctct acttaaaata caaaaattag ccaggcgtgg tggcgtgcat
3841 ttgtaatccc agctacacag gaggctgagg caggagaatt gcttgaacct ggggggcgga
3901 ggttgcaatg agccaaggtc gcgccattgc actccagcct gggcgacaga gtgacacttc
3961 tcaaaaaac
//