LOCUS AK071556 2018 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023101A16, full insert sequence. ACCESSION AK071556 VERSION AK071556.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2018) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2018 /clone="J023101A16" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2018 /db_xref="Osa1:LOC_Os03g13300" /db_xref="RAP-DB:Os03g0236200" /note="(RAP Annotation release2) Similar to Glutamate decarboxylase isozyme 3 (EC 4.1.1.15)" /note="(Rice Genome Annotation Project) glutamate decarboxylase, putative, expressed" /note="mapping to R03-TIGRv4S1-000485F (Chr.3: short arm=7160192, long arm=7163149, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 426 a 618 c 582 g 392 t ORIGIN 1 gacaccaaaa caactcgcat ccgtttcgtt caagtccccc cccgaaaaga gcttagtaga 61 agcgcgccac agagccttct cgacctggct ctcctctagc cacctctgct tcttcttctt 121 cttcttcttc ttcttcgtct gatcgccacc gaggctaaag ccaccaggag gagcaggttg 181 atagctcggc aggcaagatg gtgctctcca aggccgtctc cgagagtgac atgtccgtgc 241 actccacctt cgcctcccgc tacgtccgcg cctccctccc aaggtaccgg atgccggaga 301 actcgatccc gaaggaggcg gcgtaccaga tcatcaacga cgagctgatg ctggacggca 361 acccgcggct gaacctggcg tcgttcgtca ccacgtggat ggagcccgag tgcgacaagc 421 tcatcatggc cgccatcaac aagaactacg tcgacatgga cgagtacccc gtcaccaccg 481 agctccagaa ccggtgcgtg aacatgatcg cgcacctgtt ccacgcgccg ctcggggagg 541 acgagacggc ggtgggcgtg ggcacggtgg gttcgtcgga ggccatcatg ctggccgggc 601 tggccttcaa gcggcggtgg cagaacaagc gcaaggccga ggggaagccg ttcgacaagc 661 ccaacatcat caccggcgcc aacgtgcagg tgtgctggga gaagttcgcc cgctacttcg 721 aggtggagct caaggaggtg aagctccgcg acggctacta cgtcatggac cccgagaagg 781 ccgtcgacat ggtcaacgag aacaccatct gcgtcgccgc catcctcggc tccaccctca 841 acggcgagtt cgaggacgtc aagctactca acgacctcct cgacaaggag aacaaggaga 901 ctgggtggga gacgccgatc cacgtggacg cggcgagcgg cgggttcatc gcgccgttcc 961 tgtacccgga gctggagtgg gacttccggc tgccgtgggt gaagagcatc aacgtgagcg 1021 gtcacaagta cgggctcgtc tacgccggca tcggctggtg catctggcgc aacaaggagg 1081 acctgcccga ggagctcatc ttccacatca actacctcgg caccgaccag ccaaccttca 1141 ccctcaactt ctccaagggc tccagccagg tcatcgccca gtactaccag ctcatccgcc 1201 acggcttcga ggggtacagg aacatcatgg agaactgcca cgagaacgcg atggtgctga 1261 aggaagggct ggtgaagacg gggaggttcg acatcgtgtc caaggacgaa ggggtgccgc 1321 tggtggcgtt ctcgctcaag gaccggagcc ggcacgacga gttcgagatc tccgacatgc 1381 tgcgccgctt cggctggatc gtgccggcgt acaccatgcc gcccgacgcc cagcacgtca 1441 cggtgctccg cgtggtcatc cgggaggagt tcagccgcac cctcgccgag cgcctcgtcc 1501 tcgacatcga gaaggtgatg taccagctcg acgcgctccc ctccaggctc atgccccccg 1561 tgccgccggc gccgctgctg gtggtcgcca agaagtcgga gctcgagacg cagcggtcgg 1621 tgacggaggc gtggaagaag ttcgtgctcg ccaagaggac caacggcgtc tgctagtctc 1681 aattagcgac agcgccacgg cctacaaatc cacaaatcaa gacgctgctg attgatatga 1741 ttaattacat tcatggtgtg agctaccatt actgtatttt ttttttaccg tgctaatttg 1801 agtggagcct tcgattctag gtccaaggta ctagtagagt tcataaccaa aagccatgct 1861 cttgcttttg tttctccttc tgataatctg tgcagctgcg ctgcagcctg cactcatctc 1921 ccgagagttg taagttgaaa ctgtacgatt ttgatgttcc ctgttctagt gtaagtgcca 1981 attattgagt ggtatggaaa atatttcttc aagaaacc //