LOCUS AK066805 3000 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013078A14, full insert sequence. ACCESSION AK066805 VERSION AK066805.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 3000) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..3000 /clone="J013078A14" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 1763..2728 /db_xref="Osa1:LOC_Os02g53180" /db_xref="RAP-DB:Os02g0771600" /note="(RAP Annotation release2) Similar to 1-aminocyclopropane-1-carboxylate oxidase (Fragment)" /note="(Rice Genome Annotation Project) 1-aminocyclopropane-1-carboxylate oxidase 1, putative, expressed" /note="mapping to R02-TIGRv4S1-001425F (Chr.2: short arm=32552766, long arm=32556678, direction=forward) for TIGR Pseudomol ver4" /protein_id="BAG90130.1" /translation="MASVASFPVINMENLETEERGAAMEVIRDACENWGFFEMLNHGI AHELMDEVERVSKAHYANCREEKFKEFARRMLEAGEKGADVKGIDWESTFFVRHRPVS NLADLPDVDDHYRQVMKQFASEIEKLSERVLDLLCENLGLEKGYLKKAFAGSNGPTFG TKVSSYPPCPRPDLVDGLRAHTDAGGIILLFQDDQVSGLQLLKDGEWVDVPPMRHAIV ANIGDQLEVITNGRYKSVMHRVLTRPDGNRMSIASFYNPGADAVIFPAPALAAADAAA AAYPRFVFEDYMNLYVRHKFEAKEPRFEAMKSAAEVVHAAPIATA" BASE COUNT 695 a 810 c 769 g 726 t ORIGIN 1 gacacttcgc cggggctcca catctcctct cctcccacag tcggcggtcc tgcctctccc 61 catccggcgg cctcgagctt gagctcctct tcctcttctc tcctccgatg gctggcggcc 121 tcacctctcc ccccatccgg cggtcctctc ctcggtggag cctcgaatcg gacaacgtcg 181 accagatcga cacgacaagg aggttgaggc agatgtggat cgaggcggcc ttcgtcgggc 241 caccactgcg gacgggtcga ggtggccgtc gtcgagctgc tactgcacag gttgacaacg 301 acgatgagcg acggcttgta aatacatagt acaatatgta catgagcaat ccaggaggcg 361 actccaccag gtctgaacca ccttcctagc tcaccacctt gccaccatcg gcaacgtcac 421 ccacccactt ccgatgcctg ccctctcctc tcctctcaca ttctttttct ttctctctct 481 gcctaataca gatatttttc ttctatgaat tcaattcata ttttctcgat ccataaacac 541 tgacggcaag agcgagccat cacagacgac actcttgctc catgtgggca tcggttggtg 601 cctagagagc tgatttgata ggatgaggtt ggtcggtttg ttttgaacgt ggactaatca 661 acgtgaagca gggaagcctt tagaggaggt tggcttgttc ggtttagtag gtggttatag 721 aggtggtatt ggccggacac aatgtacggt tttttcctaa caaactaagc actgtatgtt 781 ttttttgcat aatgtatggt ttgatatttt ttttcttaaa atgttatatc ttctttaata 841 taataaattg ccacaccctt tttaaaaaac ctgatatgtg tccataggac ctagccatgt 901 gaagtctaca tttgacaaat caaattgatc aggtctgggc caggtgtact atgcccaaaa 961 ttctgtcatc atcaaatcca aaaagcaagg aacagtctct tatcgatctg tagttctcta 1021 cttaatagag ttgatcactt aggttaggta tatagaatag taaccaccac taccattata 1081 gtattacact atagtactac tacatcacaa aggcattaga cattaattag gagtaagagc 1141 aaatcttgtg gagaaccttt ttgtgactgt gtcgggtaac cggcatgaac tcaacctgcg 1201 gcgtgcacag gacacagtgt gatcagatca gataatcaga ttagcagctt agcttagctt 1261 agcttgctta cgtccacact actttactct ccgttggacc aaatcactaa actttgtcgt 1321 aaactcgtac tacctccgtg ccataataag tgtagccata agtttccgcg tccaactttg 1381 atcgtccgtc ttatttgaaa cttttttata attagtattt ttgttgttat gagatgataa 1441 aacatgaata gtactttact cgtgacttat gtttttaatt tttttaaaaa aattttcaaa 1501 taagacgaac ggttaaagtt agatgcggaa aaccatggct gcacttattt tgagatgtag 1561 gaagtaaggc ataccgcaca ccacgtcctg ggggtcaggc agtcagccta gtgaaaaaga 1621 taactgtgca agctagcttc tcgctctcgc gcctataaat tgggcgctcg ccgccggcct 1681 cagagtgcac acacagacac acagacgcac tcacacactc agcttaagcg agcgagcgag 1741 tgaacgagag agagagacag agatggcgag tgttgcctcc ttcccggtga tcaacatgga 1801 gaacctggag accgaggaga ggggcgcagc aatggaggtc atccgcgacg cctgcgagaa 1861 ctggggcttc ttcgagatgc tgaaccatgg catcgcgcac gagctgatgg acgaggtgga 1921 gcgggtgagc aaggcgcact acgccaactg ccgggaggag aagttcaagg agttcgcgcg 1981 gcggatgctg gaggccggcg agaagggcgc cgacgtgaag ggcatcgact gggagagcac 2041 cttcttcgtc cgccaccgcc ccgtctccaa cctcgccgac ctccccgacg tcgacgacca 2101 ctacaggcag gtgatgaagc aatttgcgtc ggagatcgag aagctctcgg agagggtgct 2161 ggacctgctg tgcgagaatc tgggcctgga gaagggttac ctgaagaagg ccttcgccgg 2221 gtcgaacggc ccaacgttcg gcaccaaggt gagcagctac ccgccgtgcc cgcgccccga 2281 tctcgtcgac ggcctccgcg cccacaccga cgccggtggc atcatcctgc tgttccagga 2341 cgaccaggtg agcggcctcc agctgctcaa ggacggggag tgggtggacg tgccgcccat 2401 gcgccacgcc atcgtcgcca acatcggcga ccagctggag gtgatcacca acggcaggta 2461 caagagcgtc atgcaccgcg tcctcacgcg ccccgacggc aaccgcatgt ccatcgcctc 2521 cttctacaac cccggcgccg acgccgtcat cttcccggcg cccgcgctcg ccgccgccga 2581 cgcggcggcg gccgcctacc cgaggttcgt gttcgaggac tacatgaacc tgtacgtgcg 2641 ccacaagttc gaggccaagg agccacgctt cgaggccatg aagtccgccg ccgaggtcgt 2701 ccacgcggcg cccatcgcca ccgcttgata aggatcagac ttcactagct acggctgcgc 2761 gtgccatgat ccagatatat gggatgtgta cggtagtgta cgtggtgctg tacatgccgt 2821 cccgtgtttt tctgcgtaat gtttttacgt actagactac tactagtgtg tgtacgtaac 2881 ctggggatgt aagtatcgcg tcaagtactc aagtgtgtgt aacgggcgct ctaatcgtat 2941 tgttctgtgc ttcaatggct accacgttag atgggccttg tgctaatgtt gttttatgct //