LOCUS AK066418 3349 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013067H19, full insert sequence. ACCESSION AK066418 VERSION AK066418.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 3349) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..3349 /clone="J013067H19" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..3349 /db_xref="Osa1:LOC_Os12g42310" /note="(Rice Genome Annotation Project) serine/threonine-protein phosphatase BSL2, putative, expressed" /note="mapping to R12-TIGRv4S1-000819R (Chr.12: short arm=26273988, long arm=26282196, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 763 a 779 c 1010 g 797 t ORIGIN 1 gattttccac tctcgccacc accactccgc gacaagctcg tgctcccccc caaatcccaa 61 atctcccagg ggcctcctcg atcgatccca tcccccccct cacttcgccg gcggcggctg 121 cggcggcgta agcggcgacg accggtggtg tggcgtgttc tacctagggt ttcggtgggg 181 ggaggaggga tggcagcggc ctcgccgcaa gtggcaagga gttgggagga gtaggcggag 241 ctaagagatt tttttgctct ctcgcttctt ctctgtgtgt gtgttgcgtg gtggggagga 301 agatctcgag cggttggaaa ccctagtggg gagggaggga gtgggcgggg gggatggacg 361 tggactcgag gatgacgacg gagtcggact ccgactcgga cgccgcggcg caggggggag 421 gaggaggagg gttcgggagc gagacctcct cggcgtcgcc ctcggcgccc gggacgccgg 481 cggctatggg ggcaggaggg ggagctgctc ctatcgctgc tgctgctatc gctgccgccg 541 cgtcggcggc ggtggtggcg ggcccgaggc ccgcgccggg gtacacggtg gtgaacgcgg 601 cgatggagaa gaaggaggac gggcccgggt gccggtgcgg ccacacgctc accgcggtgc 661 cggccgtcgg ggaggagggc gcgccggggt acgtggggcc gcggctgatc ctcttcggcg 721 gtgccaccgc gctcgagggg aactccgcca cgccgccatc ctcggccggg agcgccggaa 781 tccgtcttgc tggtgctact gcggatgtgc actgctacga tgtttcatcg aataagtgga 841 gcaggcttac tccagttggt gaacctcctt caccaagagc ggcacatgta gcgactgctg 901 ttggcaccat ggtggtcatt cagggtggga taggtcctgc tggtttatct gcagaagacc 961 ttcatgttct ggatcttaca caacaacgac cgcgatggca cagagtggtg gttcaagggc 1021 ctggccctgg tcctcgatat ggacatgtga tggctttggt tgggcagcgt ttcttgttga 1081 caatcggtgg aaatgatggg aagaggcccc tggctgatgt gtgggccctt gatacagcag 1141 ctaagccata tgagtggagg aaacttgaac cagaaggtga aggaccaccc ccatgcatgt 1201 atgcaactgc aagtgcccgt tctgatggac ttctattact ctgtggtggg agggatgcta 1261 atagtgtgcc cctagcaagt gcatatggcc ttgcaaaaca cagggatgga cgctgggagt 1321 gggcaatcgc ccctggtgtc tctccatcac ccagatatca acatgcagct gttttcgtca 1381 atgcacgact tcatgtctca ggaggggccc ttggaggcgg tcgcatggtt gaagactcct 1441 caagtgttgc agtgttggat actgctgctg gagtgtggtg tgatacaaaa tcagtagtta 1501 ctactccaag gacaggaaga tatagtgcag atgctgcagg cggtgatgct tctgtagagc 1561 ttacacgacg gtgcaggcat gcagctgctg cagttggtga tatgatatat gtttatggag 1621 gtctacgggg aggtgtgctg ctagatgacc ttcttgttgc cgaagatctt gctgctgctg 1681 aaacaacaaa tgcagcaaat caggcagctg caattgctgc agcctctgac atacaagctg 1741 gaagagaacc tggtaggtat gcctacaatg atgaacaaac agggcagcca gctacaataa 1801 catctcctga tggagctgtg gttcttggaa ctccagttgc tgctcccgtt aatggggaca 1861 tgtatactga tattagccct gagaacgctg tgatccaggg acaaaggaga atgagcaaag 1921 gtgttgatta tttggttgaa gcatctgctg cagaggctga ggcaatcagt gctactttag 1981 ctgctgtaaa agctcggcaa gttaatggtg aggcagagca ttcacctgac agggagcagt 2041 ctccagatgc cacaccaagt gtgaagcaaa atgcaagcct gataaaacca gactatgctc 2101 tttcaaataa ttcaacacca cctcctgggg ttcggttaca ccatagagca gttgtggtag 2161 cagcagaaac cggaggtgcc ttaggtggca tggttaggca gctctcaatt gaccagtttg 2221 aaaatgaagg aagaagggtc atctatggca ctcctgagag tgcaactgca gcaaggaagt 2281 tgctagatcg gcaaatgtct attaatagtg tacctaaaaa ggtaattgca tccctcttga 2341 aacctcgtgg ttggaagccc cctgtgcgaa ggcagttctt tttggactgc aatgagattg 2401 cagacctatg tgatagtgcg gaaagaatat tttcaagtga accaagtgtc ctacagctta 2461 aagctccaat taagatattt ggtgatttgc acggtcaatt tggtgaccta atgcgcttgt 2521 ttgatgagta cggtgctcct tcgacagctg gagacattgc ttacattgat tacctcttct 2581 tgggagatta cgtggatcgt ggtcagcata gtttggagac aatcactctt ctccttgcac 2641 ttaaggttga atatcctctt aatgtacatt tgattcgagg gaatcatgag gccgctgata 2701 tcaatgcttt gtttgggttc cgaatagagt gcatagagcg aatgggtgag cgtgatggga 2761 tctggacctg gcatcgcatg aataggctat ttaattggct tcctttggct gccctaatag 2821 agaagaaaat aatatgtatg catggtggta ttggccggtc tatcaatcat gttgaacaaa 2881 ttgagaatct tcaaagacca attaccatgg aagcaggctc ggttgttcta atggatcttc 2941 tgtggtctga tccaactgaa aatgatagtg ttgaaggact tagaccaaat gcccgtggcc 3001 caggccttgt tacctttggg ccggatcgtg ttatggagtt ctgcaacaac aatgacttac 3061 agttaattgt gcgagcacat gagtgtgtga tggatggttt tgagcgtttt gctcaaggtc 3121 acctaatcac tctcttctca gcaacaaatt actgtggtac ggcaaacaat gcgggtgcaa 3181 tcttggttct aggaagagat cttgtagtag ttccgaaact catccatcct ttgccgcctg 3241 ccattacatc tcccgagacc tctccagagc atcatcttga ggacacatgg atgcaggaac 3301 taaatgccaa caggccgcca actccaacaa ggggccgccc tcaagcagc //