LOCUS AK060824 2022 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-034-B04, full insert sequence. ACCESSION AK060824 VERSION AK060824.1 KEYWORDS oligo-capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2022) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2022 /clone="001-034-B04" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2022 /db_xref="Osa1:LOC_Os02g43280" /db_xref="RAP-DB:Os02g0647900" /note="(RAP Annotation release2) Similar to Fatty aldehyde dehydrogenase 1" /note="(Rice Genome Annotation Project) aldehyde dehydrogenase 3B1, putative, expressed" /note="mapping to R02-TIGRv4S1-001068F (Chr.2: short arm=26073932, long arm=26079676, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 526 a 470 c 565 g 461 t ORIGIN 1 aggccaaatc gcctgcaata attctctcgc cgtgtaacaa caacacacgc gccagccgag 61 agaaaccaaa cactagaccc ccaccacgag ttcacgacgt gcacgagcga gcgagctaga 121 aaagcaagcg agagcgagcg catggccccg gcaatggtag ccgccatggg agagaagccg 181 aagcccgcag tcgtgttggg tggcatggtg agcgggctga gggaggtgta cgagagcggg 241 aggaccaagg acctggagtg gaggcagtcg cagctcaagg cgctcatcag gctcctcacc 301 gacaaggagg aggagatctt cgccgtcctc cacgacgacc tcggcaagca ccgcggcgag 361 tcgttccgag acgagcttgg gattcttgtc aagtcgatca agtacacgct gcaaaacctc 421 aagaaatggg cggcttcgga gagggcggaa tcgccgttgg ttgcattccc tgcgaccgcg 481 atggtggtgc cggagccgct cggtgtcgtg ctcgttttct cctgctggaa tctgccacta 541 ggcttagcgt tggagccact ctccggcgcc atagcggccg gcaacgccgt tgttctgaag 601 ccctccgagc tcgcgccgtc caccgccgcg ttcctcgccg ccaacatccc gaggtatctg 661 gacagcaggg cagtgaaggt cgtcctggga ggccccaatg ttggagagga actcatggag 721 cacagatggg acaaggttct tttcaccggg agtgccagaa taggacgcat tatcatggct 781 aaagcagtca aacacttgac cccggttgca cttgaactgg gttcgaaatg cccatgcatc 841 gttgattggc tggacagtaa gagggatagg cagattgcgg tgaaccgcat aatcggagcg 901 aaatggtcga cttgtgctgg tcaggcttgc atcgccatcg atcacgtaat cgtcgaggag 961 agatttgcac cgattctgat tgagctactg aaatcaactc ttaagaggtt catggccaaa 1021 ccgggtggca tggcccgtat cctgaacgca aaacattttg agaggttgag tggctatctg 1081 gaggataata gggtggcagc ttctgtagtg cacggtggtt acatggaccc caagaaactg 1141 aatattgagc caaccttact gctaaatcct cctgctgatt ctgatgtcat gaccgaggag 1201 gtatttggcc cgattctccc aatcatcacg gtaaagaaga tcgaggattg catcgtgtat 1261 ttaaagtcca agccgaaacc gattgcgatg tacgccttca ccaacaacga gaggctgaaa 1321 cgccggatcg tagaggaaac gtcgtccggg agtgtcacat tcaacgacgc agttgtgcag 1381 tacgctcttg aaagcgtccc tttcggcgga gttggccata gcggattcgg acagtaccac 1441 ggcaagtact cattcgagct gttcagccac aagaaggcgg tgttcaagag aagctttctg 1501 atcgagttca tgttcagata cccaccatgg gatgagagaa agatcgggac gctgaggcac 1561 gtcttcagct ataactactt cttgctgttc ttcaacctgc tcggctttag gagatgaaga 1621 agccagccga agaaagattt cggctgtgaa gaagtaagca gagaaagaag ctactactat 1681 atagtagtat atagtagtag taatatacta cagctaaaca cgtggattat atacggttct 1741 accttgtgtg atgtgataat gtatcactat acttcagttg catattgtat tgtcacgttc 1801 tatgctctta tttattgtac tctttggaaa gaaagggagg gattgtttta ttttttttaa 1861 aaaaatgact agtggaaata gggtgctccg acatgttata cataaaagaa gatatgtaaa 1921 gagtttaagg gtgctttgga tcctcagcaa ggccaatcct agcattgtct agcaggttaa 1981 gtgtttaata caagtaaaaa aatagctttt gaagatgttg gt //