LOCUS AK046612 1883 bp mRNA linear HTC 06-OCT-2010
DEFINITION Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
enriched library, clone:B430205M18 product:INOSITOL
1,4,5-TRISPHOSPHATE 3-KINASE, ISOFORM B (EC 2.7.1.127) homolog
[Rattus norvegicus], full insert sequence.
ACCESSION AK046612
VERSION AK046612.1
KEYWORDS HTC_FLI; HTC; CAP trapper.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1883)
AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Bono,H.,
Carninci,P., Fukuda,S., Furuno,M., Hanagaki,T., Hara,A.,
Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
Hirozane,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I.,
Kasukawa,T., Katoh,H., Kawai,J., Kojima,Y., Kondo,S., Konno,H.,
Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A.,
Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numazaki,R., Ohno,M.,
Ohsato,N., Okazaki,Y., Saito,R., Saitoh,H., Sakai,C., Sakai,K.,
Sakazume,N., Sano,H., Sasaki,D., Shibata,K., Shinagawa,A.,
Shiraki,T., Sogabe,Y., Tagami,M., Tagawa,A., Takahashi,F.,
Takaku-Akahira,S., Takeda,Y., Tanaka,T., Tomaru,A., Toya,T.,
Yasunishi,A., Muramatsu,M. and Hayashizaki,Y.
TITLE Direct Submission
JOURNAL Submitted (16-JUL-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihide Hayashizaki
The Institute of Physical and Chemical Research (RIKEN), Omics
Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
URL :http://www.osc.riken.jp/
REFERENCE 2
AUTHORS
CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and
Genome Science Group (Genome Network Project Core Group)
TITLE The Transcriptional Landscape of the Mammalian Genome
JOURNAL Science 309, 1559-1563 (2005)
REFERENCE 3
AUTHORS
CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group
(Genome Network Project Core Group) and the FANTOM Consortium
TITLE Antisense Transcription in the Mammalian Transcriptome
JOURNAL Science 309, 1564-1566 (2005)
REFERENCE 4
AUTHORS
CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research
Group Phase I and II Team
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
REFERENCE 5
AUTHORS
CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the
FANTOM Consortium
TITLE Functional annotation of a full-length mouse cDNA collection
JOURNAL Nature 409, 685-690 (2001)
REFERENCE 6
AUTHORS Carninci,P. and Hayashizaki,Y.
TITLE High-efficiency full-length cDNA cloning
JOURNAL Meth. Enzymol. 303, 19-44 (1999)
REFERENCE 7
AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
TITLE Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes
JOURNAL Genome Res. 10, 1617-1630 (2000)
REFERENCE 8
AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
Inoue,Y., Kira,A. and Hayashizaki,Y.
TITLE RIKEN integrated sequence analysis (RISA) system-384-format
sequencing pipeline with 384 multicapillary sequencer
JOURNAL Genome Res. 10, 1757-1771 (2000)
COMMENT cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Please visit our web site for further details.
URL:http://www.osc.riken.jp/
URL:http://fantom.gsc.riken.jp/
clone information is available at:
http://fantom.gsc.riken.jp/3/db/annotate/
main.cgi?masterid=B430205M18
FEATURES Location/Qualifiers
source 1..1883
/clone="B430205M18"
/clone_lib="RIKEN full-length enriched mouse cDNA library"
/db_xref="FANTOM_DB:B430205M18"
/db_xref="MGI:2412071"
/db_xref="taxon:10090"
/dev_stage="4 days neonate"
/mol_type="mRNA"
/organism="Mus musculus"
/sex="male"
/strain="C57BL/6J"
/tissue_type="adipose"
misc_feature 1..1883
/note="INOSITOL 1,4,5-TRISPHOSPHATE 3-KINASE, ISOFORM B
(EC 2.7.1.127) homolog [Rattus norvegicus] (SPTR|Q91XW1,
evidence: FASTY, 90.8%ID, 50.8%length, match=1428)"
/note="putative"
BASE COUNT 395 a 557 c 614 g 317 t
ORIGIN
1 gggtagtgtc tccaaccaag cacagagcaa cgcagggtcg gcctggcggt gtcccctccg
61 ggatcgccta gtccctgcgc cggtacattc agcttcgttg caccccactt tttccgtctt
121 ccataagttg ttgcggaaac cctttgggag cttttttatt tttttaaaaa aactttaagc
181 cacttggtct gtacgagccc ggagtccccg gggcatgtcg cctgcacggg acctggaagt
241 ctgagcaatt gcagccgcga aatcgtttat ggagcttggg gcgggggccg agcccgcgat
301 tttgccctgt gcccgccgcc taggccatgc tgctccatca gcgcgcagag ctacggccgc
361 cgggcctccg ggactaagcc gagagccgcg ggaggaggag gcgccggcgg tggagcggga
421 cggagagccg cggcggcggg cggaccctgt actatggctg tgtactgcct atgccctcaa
481 tagcctggtg atcatgaaca gcaccaacga gctcaagagt ggcggccccc ggcccagcgg
541 cagcgagacg ccccagccct ccgggagggc cgcgctgagt cccggcagcg tcttcagccc
601 tgggagaggc gcttcctttc tcttcccccc agcagagtcg ctgtccctgg aggagcccgg
661 gagtcctggg gctggcgcag cggccggcgc aggctgaata gtagcagcgg tagcggaggt
721 ggcagcagca gcagcaacag cagcagcagc agtggcgtgg gcagtcccag ttgggctggc
781 cgcctgcgag gggacgcgca gcaggtggtg gcggcccgca tcctctcccc acctgggcca
841 gaggaggccc agaggaagct gcggattctg cagcgcgagt tgcaaaatgt gcaggtgaac
901 cagaaagtgg gcatgttcga ggcgcaaatc caggcacaga gctctgccat tcaagcgccc
961 cgaagcccgc gtttgggtag ggctcgttcg ccctccccgt gtcccttccg aagtagcagc
1021 cagccccccg aaagggtctt ggctccgtgt tctccaagtg aggaacgcag aacaaagtcc
1081 tggggagaac aatgtacaga aaccccagat accaactctg gaaggagaag cagactcagc
1141 acacacccct cgaaggacaa ggagggagtg gcccctcttt taggcccagc cagcccgacc
1201 aggttaggga ctcagagtcc atctacttcc gtgagaatgg aaagaggtac cccggccagt
1261 ccccgctgtg gctcacccac acccatggaa actgacaaga gggttgctcc ctcactggag
1321 cgctttggaa ctagcttaac gttggctact aaagtggcag cttcagccgc atccgctgga
1381 ccacaccctg gacatgattc tgccctcatg gagacaggct gtgagctcgg gggcatgcgc
1441 ccctgggagg cccagatgga gagacggggg cagtttctgg gcaaggagac cggctcaacc
1501 ccagagcctg tccggaccca catgagagaa ccccctggaa gggtgggaag aggaattcat
1561 tctgttggtg ggcagggctc ctggacacct gaagtcatca aaagaccaga agagagggct
1621 gtgactgccc aaagctcaga gccctcagag gaccccagat ggtctagact gcctgtagac
1681 ctggattccg taggacctga gaagggagga aataggatcc cagggatgcg agggccccag
1741 cagaccctgg acagtgagag agaaggctct ccagcactgg gcttgcttgg gggcagccag
1801 gcagcacagc caggggctag gggtgtggag gaagacgttc attatggccg aatgctggaa
1861 cctttaccac ctggggaagt aac
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