LOCUS AK021421 1708 bp mRNA linear HUM 03-JUN-2021
DEFINITION Homo sapiens cDNA FLJ11359 fis, clone HEMBA1000216, moderately
similar to HYPOXIA-INDUCIBLE FACTOR 1 ALPHA.
ACCESSION AK021421
VERSION AK021421.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1708)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Isogai,T., Ota,T., Hayashi,K., Sugiyama,T., Otsuki,T., Suzuki,Y.,
Nishikawa,T., Nagai,K., Sato,H., Sugano,S., Takahashi-Fujii,A.,
Hara,H., Tanase,T., Nomura,Y., Togiya,S., Komai,F., Hara,R.,
Takeuchi,K., Arita,M., Nabekura,T., Ishii,S., Kawai,Y., Saito,K.,
Yamamoto,J., Wakamatsu,A., Nakamura,Y., Nagahari,K., Masuho,Y. and
Oshima,A.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2000)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
International Trade and Industry of Japan; cDNA full insert
sequencing: Research Association for Biotechnology; cDNA library
construction, 5'- & 3'-end one pass sequencing and clone
selection: Helix Research Institute (supported by Japan Key
Technology Center etc.) and Department of Virology, Institute of
Medical Science, University of Tokyo.
FEATURES Location/Qualifiers
source 1..1708
/clone="HEMBA1000216"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000004695"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 125..724
/codon_start=1
/protein_id="BAB13819.1"
/translation="MRPAAGAARRPRCCTSWLTRCPSPAASAPTWTRPLSCASPSATC
ACTASAPQLELIGHSIFDFIHPCDQEELQDALTPQQTLSRRKVEAPTERCFSLRMKST
LTSRGRTLNLKAATWKVLNCSGHMRAYKPPAQTSPAGSPDSEPPLQCLVLICEAIPHP
GSLEPPLGRGAFLSRHSLDMKFTYCDDRVAEVAGYSPMT"
misc_feature 280^281
/note="146 bases segment is present in AK21653, probably
caused by alternative splicing."
misc_difference 714^715
/inference="similar to sequence:INSD:AC007193.1"
/inference="similar to sequence:INSD:AK021653.1"
/replace="c"
BASE COUNT 340 a 588 c 461 g 319 t
ORIGIN
1 actcgtaact cgcacccggg tcctggctgc accgcatccc ctcctgcacc ccctggatgg
61 cccttcagcc aacgggggcc tgggcgatgg tcgaccacgg agctgcgcaa ggaaaagtcc
121 cgggatgcgg cccgcagccg gcgcagccag gagaccgagg tgctgtacca gctggctcac
181 acgctgccct tcgcccgcgg cgtcagcgcc cacctggaca aggcctctat catgcgcctc
241 accatcagct acctgcgcat gcaccgcctc tgcgccgcag ctggagctca ttggacacag
301 catctttgat ttcatccacc cctgtgacca agaggagctt caggacgccc tgacccccca
361 gcagaccctg tccaggagga aggtggaggc ccccacggag cggtgcttct ccttgcgcat
421 gaagagtacg ctcaccagcc gcgggcgcac cctcaacctc aaggcggcca cctggaaggt
481 gctgaactgc tctggacata tgagggccta caagccacct gcgcagactt ctccagctgg
541 gagccctgac tcagagcccc cgctgcagtg cctggtgctc atctgcgaag ccatccccca
601 cccaggcagc ctggagcccc cactgggccg aggggccttc ctcagccgcc acagcctgga
661 catgaagttc acctactgtg acgacagggt tgcagaagtg gctggctata gtccgatgac
721 ctgatcggct gttccgccta cgagtacatc cacgcgctgg actccgacgc ggtcagcaag
781 agcatccaca ccttgctgag caagggccag gcagtaacag ggcagtatcg cttcctggcc
841 cggagtggtg gctacctgtg gacccagacc caggccacag tggtgtcagg gggacggggc
901 ccccagtcgg agagtatcgt ctgtgtccat tttttaatca gccaggtgga agagaccgga
961 gtggtgctgt ccctggagca aacggagcaa cactctcgca gacccattca gcggggcgcc
1021 ccctctcaga aggacacccc taaccctggg gacagccttg acacccctgg cccccggatc
1081 cttgccttcc tgcacccgcc ttccctgagc gaggctgccc tggccgctga cccccgccgt
1141 ttctgcagcc ctgacctccg tcgcctcctg ggacccatcc tggatggggc ttcagtagca
1201 gccactccca gcaccccgct ggccacacgg cacccccaaa gtcctctttc ggctgatctc
1261 ccagatgaac tacctgtggg caccgagaat gtgcacagac tcttcacctc cgggaaagac
1321 actgaggcag tggagacaga tttagatata gctcaggacc ccagcacccc actcctgaac
1381 ctgaatgagc ccctgggttt tcactttgtc acccagtctg gagtgcagtg gcacaaacac
1441 agctcaccgc agcctcgacc tcctgggctc aagtgatcct cctacttcag ctcccacaag
1501 tagctgggac tgcagctatg tgccatcatg cctggctgat gtttatatgt tttgtagaga
1561 cgaggtttca ccatgttgcc caggctggtc ttgaactcct gagttcaagc gatccacctg
1621 ccttggcctc ccaaagtgct gggattactg gtatgaacca ccacgcccga cagtaaatat
1681 gttttgaatg aataaactct cataaatg
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