LOCUS AJ245539 2007 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens partial mRNA for GalNAc-T5 (GALNT5 gene).
ACCESSION AJ245539
VERSION AJ245539.1
KEYWORDS GalNAc-T5; GALNT5 gene.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2007)
AUTHORS Bennett E.P.
JOURNAL Submitted (13-AUG-1999) to the INSDC. Bennett E.P., Glycobiology
Group, 24.5.33, School of Dentistry, Noerre Alle' 20, Copenhagen
2200N, DENMARK.
REFERENCE 2
AUTHORS Bennett E.P.
JOURNAL Unpublished.
COMMENT Related sequence: AF049344 (Rattus norvegicus mRNA)
FEATURES Location/Qualifiers
source 1..2007
/db_xref="H-InvDB:HIT000245882"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <1..2007
/codon_start=1
/gene="GALNT5"
/product="GalNAc-T5"
/function="polypeptide N-acetylgalactosaminyltransferase
T5"
/db_xref="GOA:Q7Z7M9"
/db_xref="H-InvDB:HIT000245882.12"
/db_xref="HGNC:HGNC:4127"
/db_xref="InterPro:IPR000772"
/db_xref="InterPro:IPR001173"
/db_xref="InterPro:IPR029044"
/db_xref="InterPro:IPR035992"
/db_xref="UniProtKB/Swiss-Prot:Q7Z7M9"
/experiment="experimental evidence, no additional details
recorded"
/protein_id="CAB65104.1"
/translation="AEGLPFPKFTVNSNRLRKQSINETPLGSLSKDDGARGAHGKKLN
FSESHLVIITKEEEQKADPKEVSNSKTKTIFPKVLGKSQSKHISRNRSEMSSSSLAPH
RVPLSQTNHALTGGLEPAKINITAKAPSTEYNQSHIKALLPEDSGTHQVLRIDVTLSP
RDPKAPGQFGRPVVVPHGKEKEAERRWKEGNFNVYLSDLIPVDRAIEDTRPAGCAEQL
VHNNLPTTSVIMCFVDEVWSTLLRSVHSVINRSPPHLIKEILLVDDFSTKDYLKDNLD
KYMSQFPKVRILRLKERHGLIRARLAGAQNATGDVLTFLDSHVECNVGWLEPLLERVY
LSRKKVACPVIEVINDKDMSYMTVDNFQRGIFVWPMNFGWRTIPPDVIAKNRIKETDT
IRCPVMAGGLFSIDKSYFFELGTYDPGLDVWGGENMELSFKVWMCGGEIEIIPCSRVG
HIFRNDNPYSFPKDRMKTVERNLVRVAEVWLDEYKELFYGHGDHLIDQGLDVGNLTQQ
RELRKKLKCKSFKWYLENVFPDLRAPIVRASGVLINVALGKCISIENTTVILEDCDGS
KELQQFNYTWLRLIKCGEWCIAPIPDKGAVRLHPCDNRNKGLKWLHKSTSVFHPELVN
HIVFENNQQLLCLEGNFSQKILKVAACDPVKPYQKWKFEKYYEA"
BASE COUNT 622 a 402 c 468 g 515 t
ORIGIN
1 gccgagggtc ttccttttcc taagttcact gtcaattcaa atcgcttaag gaagcaatct
61 attaatgaga cacctttggg aagtttgtca aaggatgatg gagctagagg ggctcatggg
121 aagaaactca atttctctga aagccatctt gtgattataa ccaaagagga agagcaaaag
181 gcagacccca aagaggtctc taattctaaa accaaaacaa tatttcctaa agtattgggt
241 aaaagccaaa gtaaacacat ttccaggaat agaagtgaga tgtcttcctc ttcacttgct
301 ccacatagag tgccactgtc ccaaactaac catgctttaa ctggagggct agagccagca
361 aaaatcaaca taactgccaa agccccctct acagaataca accagagtca tataaaagcc
421 cttttacctg aagacagtgg aacgcaccag gtgttaagaa ttgatgtgac actttctcca
481 agggacccca aagctccagg gcagtttggg cgtcctgtag ttgtccccca tggaaaggag
541 aaggaggcag aaagaagatg gaaagaagga aacttcaatg tctaccttag cgatttgatc
601 ccagtggata gagccattga agacaccaga cctgctggat gtgcagagca gctagttcac
661 aataacctcc caaccaccag tgtcatcatg tgctttgtgg atgaagtgtg gtccactctc
721 ctgagatctg ttcacagtgt catcaatcgc tctcctccac acctcatcaa ggagattctg
781 ctggtagatg acttcagcac caaagactat ctaaaagata atttggataa atacatgtcc
841 cagtttccaa aagttcggat tcttcgcctc aaagagagac atggcttaat aagggccagg
901 ctggcaggag cacagaatgc aacaggtgat gtgttgacat ttttagattc tcatgtggaa
961 tgtaacgttg gttggttgga acctcttctg gaaagagttt atttaagtag aaagaaagtg
1021 gcctgtccag taatcgaagt catcaatgat aaggatatga gttacatgac agtggataac
1081 tttcaaagag gcatctttgt gtggcccatg aactttggtt ggagaacaat tcctccagat
1141 gtcattgcaa aaaacagaat taaagaaact gatacaataa ggtgccctgt catggctggt
1201 ggattgtttt ctattgacaa aagttacttt tttgaacttg gaacatacga ccctggcctt
1261 gatgtttggg gtggggaaaa tatggagctc tcattcaagg tgtggatgtg tggtggtgaa
1321 attgagatca ttccctgctc ccgagtgggc catatattca gaaatgacaa tccatattcc
1381 ttccccaaag accggatgaa gacagtggag cggaacttgg tgcgggttgc cgaggtctgg
1441 ctggatgagt ataaggagct gttctatggc catggagacc acctcatcga ccaagggcta
1501 gatgttggca acctcaccca gcaaagggag ctgcgaaaga aactgaagtg caaaagtttc
1561 aaatggtact tggagaatgt ctttcctgac ttaagggctc ccattgtgag agctagtggt
1621 gtgcttatta atgtggcttt gggtaaatgc atttccattg aaaacactac agtcattctg
1681 gaagactgcg atgggagcaa agagcttcaa caatttaatt acacctggtt aagacttatt
1741 aaatgtggag aatggtgtat agcccccatc cctgataaag gagccgtaag gctgcaccct
1801 tgtgataaca gaaacaaagg gctaaaatgg ctgcataaat caacatcagt ctttcatcca
1861 gaactggtga atcacattgt ttttgaaaac aatcagcaat tattatgctt ggaaggaaat
1921 ttttctcaaa agatcctgaa agtagctgcc tgtgacccag tgaagccata tcaaaagtgg
1981 aaatttgaaa aatattatga agcctga
//