LOCUS AF152335 4599 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma B6 (PCDH-gamma-B6) mRNA, complete
cds.
ACCESSION AF152335
VERSION AF152335.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4599)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4599)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4599)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4599
/db_xref="H-InvDB:HIT000071761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4599
/gene="PCDH-gamma-B6"
CDS 1..2793
/gene="PCDH-gamma-B6"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma B6"
/protein_id="AAD43729.1"
/translation="MGGSCAQRRRAGPRQVLFPLLLPLFYPTLSEPIRYSIPEELAKG
SVVGNLAKDLGLSVLDVSARKLRVSAEKLHFSVDAESGDLLVKNRIDREQICKERRRC
ELQLEAVVENPLNIFHVIVVIEDVNDHAPQFDKKEIHLEIFESASAGTRLSLDPATDP
DININSIKDYKINSNPYFSLMVRVNSDGGKYPELSLEKLLDREEQRSHSLILTALDGG
DPPRSATAHIEISVKDTNDNPPVFSRDEYRISLSENLPPGSPVLQVTATDQDEGVNAE
INYYFRSTAQSTKHMFSLDEKTGMIKNNQSFDFEDVERYTMEVEAKDGGGLSTQCKVI
IEILDENDNSPEIIITSLSDQILENSPPGMVVALFKTRDLDFGGNGEVRCNIETDIPF
KIYSSSNNYYKLVTDGALDREQTPEYNVTIVATDRGKPPLSSSRSITLYVADINDNAP
VFDQTSYVVHVAENNPPGASIAQVSASDPDLGLNGHISYSIVASDLEPLAVSSYVSVS
AQSGVVFAQRAFDHEQLRAFALTLQARDHGSPTLSANVSLRVLVGDRNDNAPRVLYPA
LGPDGSAFFDMVPRSAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTG
EVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADNLQEILPDLSDRPVLS
DPQAELQFYLVVALALISVLFLLAVILAIALRLRRSLSPATWDCFHPGLCVKSGPVVP
PNYSEGTLPYSYNLCIAHTGTKEFNFLKCSVPLHSNEDMVCSVSPGALIPPHGGEDLT
SHPETLTSQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASE
AADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAP
AGGNGNKKKSGKKEKK"
BASE COUNT 1055 a 1317 c 1191 g 1036 t
ORIGIN
1 atgggaggga gctgcgcgca gaggcgccgg gccggcccgc ggcaggtgct atttcctttg
61 ctgctgcctt tgttctaccc caccctgagt gagccgatcc gctactcgat tccggaggag
121 ctggccaagg gctcggtggt ggggaacctc gctaaggatc tagggctcag tgtcctggat
181 gtgtcggctc gcaagctgcg agtgagcgcg gagaagctgc acttcagcgt agacgcggag
241 agcggggact tacttgtgaa gaaccgaata gaccgtgagc aaatatgcaa agagagaaga
301 agatgtgagt tgcaattgga agctgtggtg gaaaatcctt taaatatttt tcatgtcatt
361 gtggtgattg aggatgttaa tgaccacgcc cctcaatttg ataaaaagga aatacattta
421 gaaattttcg aatctgcatc cgctggtaca cgactatcgc ttgaccctgc cacggatcct
481 gatataaaca taaactcaat taaagattat aagataaact ctaatcctta tttttcatta
541 atggttagag ttaattccga tggtggcaaa tacccagagt tatctctgga gaaactccta
601 gaccgggaag aacagagatc tcatagcttg atattgactg ccttggacgg aggggaccca
661 ccaagaagtg ccaccgctca catagaaatt tctgtcaagg ataccaatga taaccccccg
721 gttttcagca gagacgaata tagaattagt cttagtgaaa atctgccccc tgggtcccct
781 gtgttgcaag tgacagccac tgaccaggat gagggggtca atgctgagat aaactactac
841 ttccgaagca ctgcccagag cacaaaacat atgttctcat tggatgagaa aacaggtatg
901 attaagaata accagtcatt tgattttgaa gatgtagaaa ggtacaccat ggaagtggaa
961 gcgaaggacg gaggtggtct ctctacccag tgtaaagtaa tcatagaaat ccttgatgaa
1021 aacgacaaca gcccagaaat aatcatcact tctctctctg atcagatttt ggagaattca
1081 cctccaggaa tggttgttgc cctcttcaaa acacgggatc tggatttcgg aggaaatgga
1141 gaagtcaggt gtaatataga aacagacatt ccattcaaga tttattcttc ttccaataac
1201 tactacaaac tggtgacaga tggagccctg gaccgagagc agacaccaga atacaatgtc
1261 accatcgtag ccactgacag gggcaagccg cctctttctt ccagtagaag catcaccttg
1321 tatgtcgctg acatcaacga caacgcccca gttttcgacc agacgtccta cgtggtccac
1381 gtggccgaga acaacccgcc aggagcctcc attgcgcaag tgagcgcctc tgacccggat
1441 ttggggctca atggccacat ctcctactct atagtggcga gtgacctaga gcccctggcg
1501 gtgtcgtcat acgtgtcagt gagcgcgcag agcggggtgg tgttcgcgca gcgcgccttt
1561 gatcacgagc agctgcgcgc cttcgcgctc acgctgcagg cccgcgacca cggctcgccc
1621 acgctcagcg ccaacgtgag cctgcgcgtg ttggtgggag accgcaatga caacgcaccg
1681 cgggtgctgt acccagctct gggtcctgac ggctccgcgt tcttcgatat ggtacctcgc
1741 tctgcagagc ccggctacct agtgactaag gtggtagcgg tggacgccga ctcgggacac
1801 aacgcctggc tgtcctacca cgtgctgcag gccagtgagc ccggactctt cagcctgggg
1861 ctgcgcactg gggaggtgcg cacggctcga gccttaggcg acagggacgc agcccgccag
1921 cgcctgctgg tcgctgtgcg tgacggtgga cagccgccac tctctgccac cgccacgctt
1981 catctggtct tcgcagacaa cttgcaagag atactgccag acctcagcga ccgccctgta
2041 ctctctgacc cccaggctga actgcagttt tacctggtgg tggccttggc cttaatctca
2101 gtgctcttcc tcctcgccgt gattctggcc attgccttgc gcctgcgacg ctctctcagc
2161 cctgctactt gggactgctt ccatcctggt ctctgtgtca agtctggacc tgtagttccc
2221 cccaactaca gtgaggggac tttgccttat tcttataatc tgtgcattgc acatacgggt
2281 acaaaagagt ttaatttcct aaaatgcagt gtgcccctac attccaatga agacatggtt
2341 tgcagtgttt ctcctggagc cttaattcca cctcatggtg gggaggattt gacttcacat
2401 cctgagactc tgacttcgca agccccgccc aacacggact ggcgtttctc tcaggcccag
2461 agacccggca ccagcggctc ccaaaatggc gatgacaccg gcacctggcc caacaaccag
2521 tttgacacag agatgctgca agccatgatc ttggcgtccg ccagtgaagc tgctgatggg
2581 agctccaccc tgggaggggg tgccggcacc atgggattga gcgcccgcta cggaccccag
2641 ttcaccctgc agcacgtgcc cgactaccgc cagaatgtct acatcccagg cagcaatgcc
2701 acactgacca acgcagctgg caagcgggat ggcaaggccc cagcaggtgg caatggcaac
2761 aagaagaagt cgggcaagaa ggagaagaag taacatggag gccaggccaa gagccacagg
2821 gcggcctctc cccaaccagc ccagcttctc cttacctgca cccaggcctc agagtttcag
2881 ggctaacccc cagaatactg gtaggggcca aggccatgct ccccttggga aacagaaaca
2941 agtgcccagt cagcacctac cccttccccc ccagggggtt gaatatgcaa aagcagttcc
3001 gctgggaacc cccatccaat caactgctgt acccatgggg gtagtggggt tactgtagac
3061 accaagaacc atttgccaca ccccgtttag ttacagctga actcctccat cttccaaatc
3121 aatcaggccc atccatccca tgcctccctc ctccccaccc cactccaaca gttcctcttt
3181 cccgagtaag gtggttgggg tgttgaagta ccaagtaacc tacaagcctc ctagttctga
3241 aaagttggaa gggcatcatg acctcttggc ctctcctttg attctcaatc ttcccccaaa
3301 gcatggtttg gtgccagccc cttcacctcc ttccagagcc caagatcaat gctcaagttt
3361 tggaggacat gatcaccatc cccatggtac tgatgcttgc tggatttagg gagggcattt
3421 tgctaccaag cctcttccca acgccctggg gaccagtctt ctgttttgtt tttcattgtt
3481 tgacgtttcc actgcatgcc ttgacttccc ccacctcctc ctcaaacaag agactccact
3541 gcatgttcca agacagtatg gggtggtaag ataaggaagg gaagtgtgtg gatgtggatg
3601 gtgggggcat ggacaaagct tgacacatca agttatcaag gccttggagg aggctctgta
3661 tgtcctcagg ggactgacaa catcctccag attccagcca taaaccaata actaggctgg
3721 acccttccca ctacataata gggctcagcc caggcagcca gctttgggct gagctaacag
3781 gaccaatgga ttaaactggc atttcagtcc aaggaagctc gaagcaggtt taggaccagg
3841 tccccttgag aggtcagagg ggcctctgtg ggtgctgggt actccagagg tgccactggt
3901 ggaagggtca gcggagcccc agcaggaagg gtgggccagc caggccattc ttagtccctg
3961 ggttggggag gcagggagct agggcaggga ccaaatgaac agaaagtctc agcccaggat
4021 ggggcttctt caacagggcc cctgccctcc tgaagcctca gtccttcacc ttgccaggtg
4081 ccgtttctct tccgtgaagg ccactgccca ggtccccagt gcgcccccta gtggccatag
4141 cctggttaaa gttccccagt gcctccttgt gcatagacct tcttctccca cccccttctg
4201 cccctgggtc cccggccatc cagcggggct gccagagaac cccagacctg cccttacagt
4261 agtgtagcgc cccctccctc tttcggctgg tgtagaatag ccagtagtgt agtgcggtgt
4321 gcttttacgt gatggcgggt gggcagcggg cggcgggctc cgcgcagccg tctgtccttg
4381 atctgcccgc ggcggcccgt gttgtgtttt gtgctgtgtc cacgcgctaa ggcgaccccc
4441 tcccccgtac tgacttctcc tataagcgct tctcttcgca tagtcacgta gctcccaccc
4501 caccctcttc ctgtgtctca cgcaagtttt atactctaat atttatatgg ctttttttct
4561 tcgacaaaaa aataataaaa cgtttcttct gaaaagctg
//