LOCUS AB209681 6400 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for RAP guanine-nucleotide-exchange factor 4
variant protein.
ACCESSION AB209681
VERSION AB209681.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6400)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..6400
/clone="pf06711"
/db_xref="H-InvDB:HIT000329616"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003001942"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <3346..5277
/codon_start=1
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="RAP guanine-nucleotide-exchange factor 4
variant"
/protein_id="BAD92918.1"
/translation="CASILIISLFIFLCLVFNQGEEGTSWYIILKGSVNVVIYGKGVV
CTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEH
DQDVLVLEKVPAGNRASNQGNSQPQQKYTVMSGTPEKILEHFLETIRLEATLNEATDS
VLNDFIMMHCVFMPNTQLCPALVAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWAA
MYGDLLQEDDVSMAFLEEFYVSVSDDARMIAALKEQLPELEKIVKQISEDAKAPQKKH
KVLLQQFNTGDERAQKRQPIRGSDEVLFKVYCMDHTYTTIRVPVATSVKEVISAVADK
LGSGEGLIIVKMSSGGEKVVLKPNDVSVFTTLTINGRLFACPREQFDSLTPLPEQEGP
TVGTVGTFELMSSKDLAYQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLR
RFNEIQFWVVTEICLCSQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVS
RLALTWEKLPSKFKKFYAEFESLMDPSRNHRAYRLTVAKLEPPLIPFMPLLIKDMTFT
HEGNKTFIDNLVNFEKMRMIANTARTVRYYRSQPFNPDAAQANKNHQDVRSYVRQLNV
IDNQRTLSQMSHRLEPRRP"
BASE COUNT 1882 a 1292 c 1337 g 1889 t
ORIGIN
1 cgccaggagt ccgggaggag cggggtccgc gcggcggacg aggcgggggc ggaggcgcag
61 gcagagcgag cgcgggaggt cgccgcagcc agggacaccg cgcgccgccg ctcaacatgg
121 tcgctgcgca cgctgcccat tcttcctcct ctgccgagtg gatcgcctgc ctggataaaa
181 gaccactgga gcgatccagc gaagatgtgg atataatctt cactcgactg aaagaagtta
241 aagcttttga gaaatttcac ccaaatctcc ttcatcagat ttgcttatgt ggttattatg
301 agaatctgga aaagggaata acattatttc gccagggtga tattggaaca aactggtatg
361 ctgtcctggc agggtctttg gatgttaaag tatctgagac cagcagtcac caggatgctg
421 tgaccatctg taccctggga attgggacgg cctttggaga gtccattctg gacaacacac
481 cccgccatgc aaccatcgtt accagggaga gcagtgaact gctccgcatc gagcagaagg
541 acttcaaggc actatgggag aaatatcgac agtatatggc aggacttctg gctcctcctt
601 atggtgttat ggaaacgggc tctaacaatg acaggattcc tgacaaggag aacacacctc
661 tcattgaacc tcacgttcct cttcgtcctg ctaacaccat taccaaggtc ccttcagaga
721 agatcctcag agctggaaaa attttacgaa atgccattct ctctcgagca cctcacatga
781 taagagatag aaaataccac ctaaagacat acagacaatg ctgtgtggga actgaactgg
841 tggactggat gatgcagcag acaccatgtg ttcactcccg gactcaagct gttggcatgt
901 ggcaagtcct gttagaagat ggtgttctca accacgtgga ccaggagcac catttccaag
961 acaaatattt attctatcga tttctggatg atgagcacga ggatgcccct ttgcctactg
1021 aggaggagaa gaaggagtgt gatgaggagc tccaggacac catgctgctg ctgtcacaga
1081 tgggccccga cgcccacatg aggatgatcc ttcgcaaacc acctggccag aggactgtgg
1141 atgacctaga gattatctat gaggagcttc ttcatattaa agccttatcc catctttcta
1201 ccacagtgaa acgagagtta gcaggtgttc tcatttttga gtctcacgcc aaaggaggga
1261 ctgtgtgtaa gtgaaaagct gtactggaac cttgcgcctg gccagcaccc ttgcaagcac
1321 atgccacggg aagccaggct gctaacgcct cacttcttgg ccccgggtct ggcttggtga
1381 cttggcaggg tgtcctgtgg tactttcgtt tttctggacc tgtgattatt tccagcacat
1441 gtcaattatt ctgaagtatc gtggttttct agtaccagca agtgttgtgg gtgccagcct
1501 gagtctcact ggctccctac cctcctgact caccacagtg tttaaagagg gtgggatgaa
1561 gtcactgccc ttcaggaagg gcctgaggca gtaccttttc ccagtgacct catttcgttc
1621 atagctttag aagaactaat cgatctcttg aggttgttag ttagaatgat atttaaacca
1681 tcctacttta tttttcttct ctcacttcca ctttaagctc caagctggag agaatttctt
1741 tgcttcaaat acatatgcag tgttaatcta tagtatctca ccaaaatcca agttgcagtt
1801 tagttctgtg atcatatttg gaagcaagaa aaggaaattt gatgtgaata gatgtgaaca
1861 atattatata agctggcatt ccttactact cctacaaaaa tctggctgga acaaacaggg
1921 ttagtgatct actaaggtca ggaaatgcct ctccaatctc tcttgcagaa tcacaggaca
1981 cagcagcatg ctaatgtgtt ctcagaagtt ctgcaataag gagaaatgat caccacgttt
2041 aaaccgatac ttcctgagcc taatgacaca tagaacactt tttgcatgga cacctgttaa
2101 ctctttagag acagtttgga aaatcttgct ctttcttcag gctacattgt atgagtcaaa
2161 taagcaggaa acattaattg taaatgtggt ttttttactt tcagtcatca aaaatgatat
2221 ttctgacatt gatatctatt ttagtaagaa tgtaacttct tcaaatgttc aaggcttact
2281 ttaatatttt tatcttaatg gttgctaatg acttattctt ttttattttc ttttattctt
2341 ttcattcaaa cttgctaatt gttttcattt tattatgaaa tagttaaata ttttaaacaa
2401 aaaatagagt atattacaat taccttctta atctttgtca gataataaca tgccattttt
2461 ttcatatttt cttttttttt ttttgagacc ctgtctcaaa aaataaaaaa taaaaaataa
2521 attatacaac tacacttgaa gaccctttgt accctcattt atcccatttt catctttcct
2581 accccaaggt aactcctacc ctgaatgtag tggtgatcat tctaactcac ttttttaaaa
2641 atacagtcag tcctctacat ctatgtgttc cacgtttacg aattcaaccc actgaagatc
2701 aaaaatattc caaaaaaaag aaagtggatg gttgtgtctc tactgaacat gtacagactt
2761 ttttcttgtt attattcctt aaataataca gtataacaac tatttacata ggatttacat
2821 tgtattagct attataagta atctggaaat gacttaaagt atacaagaag ctgtgtgtag
2881 actatatgca aatacaccac tttatatcag gggcttgagc atctgtggat tttgatatcc
2941 ttgggaggtc ctggcaccaa ttccccatgg atacgaaggg acaagtgtgt gtaggtatgt
3001 atctgtaaac aatatatagt gctgatttgc atgtttttaa acgtcacatt acttgtcaga
3061 ttacatttta gagccatttt tctatgggat aagttttaat gaattgtgga agaaatgtgt
3121 atggctttaa gaaacagatt gctgataaat tgatatctac taaaaaccta tgttttaggg
3181 catagcaagg aatgcagtgt ttctctttct tttgtattct atagaaaagg agataatgtg
3241 ccacctgaac aagttaatat ttgccagtga tgtttctcga attttacgta tgcatatttt
3301 ctggggactt aaagtgatga tttgataagc tgtaatttat attgatgtgc ttctattctt
3361 atcataagtc ttttcatctt tttgtgtcta gtgtttaacc agggggaaga aggtacctcc
3421 tggtacatta ttctaaaagg atcagtgaat gtagtcattt acggcaaggg tgtggtctgc
3481 accctgcatg aaggagatga cttcggcaag ttagcactag tgaatgatgc cccacgagct
3541 gcctctatcg tcttacgaga agataactgc catttcttaa gagtagacaa ggaggatttc
3601 aaccggatcc taagggacgt ggaggcgaat acagtcagac ttaaagaaca tgaccaagat
3661 gtcttggtgc tggagaaggt cccagcaggg aacagagctt ctaatcaagg aaactcacag
3721 cctcagcaaa agtatactgt gatgtcagga acacctgaaa aaattttaga gcattttcta
3781 gaaacaatac gccttgaggc aactttaaat gaagcaacag attctgtttt aaatgacttt
3841 attatgatgc actgtgtttt tatgccaaat acccagcttt gcccggcact ggtggcccac
3901 taccacgcac agccttcaca aggtacagaa caggagaaaa tggattatgc cctcaacaat
3961 aagaggcgag tcatccgcct ggttctacag tgggctgcca tgtatggaga cctcctgcaa
4021 gaggatgacg tgtctatggc cttcctggag gagttttatg tatctgtatc agatgatgcc
4081 cggatgattg ctgccctcaa ggagcaactg ccagagttgg agaagattgt caagcaaatc
4141 tcagaagatg caaaggcacc acaaaagaag cacaaggttc ttttgcaaca gttcaatacg
4201 ggcgatgaga gagcccagaa gcgccagcct atccgcggct ctgatgaagt tctgtttaag
4261 gtctattgca tggaccacac ctacacaacc attcgggtgc cagtggccac ttcggtgaag
4321 gaagtcatca gtgcagttgc cgacaagctg ggctccgggg agggcctgat catagtcaag
4381 atgagttccg gaggagaaaa ggtggtgctc aaacctaatg atgtttcagt atttacgacg
4441 ctcaccatta atggacgcct gtttgcttgc ccgcgagagc aattcgattc actgactccc
4501 ttaccagaac aggaaggccc aactgttgga acagtgggaa cttttgaact gatgagctcc
4561 aaagatttag cataccagat gacaatttat gattgggaac tcttcaactg cgtgcatgag
4621 ctggagctaa tctatcacac atttggaagg cataatttta aaaagaccac agcaaacttg
4681 gatttgttcc tgaggagatt taatgaaatt cagttttggg tcgtcactga gatctgcctt
4741 tgttctcagc tcagcaagcg tgttcagcta ttaaaaaaat ttattaagat agcagcccac
4801 tgtaaggagt ataaaaatct gaattccttt tttgccatcg tcatgggact aagtaacgtt
4861 gctgtgagcc gcttggcact aacgtgggag aaactgccaa gcaagttcaa gaagttctat
4921 gcggagtttg aaagtttaat ggacccttca aggaaccaca gggcctacag gctgacagta
4981 gctaagctgg aacctcctct catccccttc atgcctttgc tcattaaaga tatgacattt
5041 actcatgagg ggaacaagac gttcattgac aatctagtaa actttgaaaa aatgcgcatg
5101 attgcaaata cggccagaac agtgagatac tacaggagcc aacccttcaa tcctgatgca
5161 gctcaagcta ataagaacca tcaggatgtc cggagttatg tacggcaatt aaatgtgatt
5221 gacaaccaga gaactttatc acagatgtca cacagattag agcctcgtcg accatagaca
5281 tttcaaatgc ccaaagcaac agtttgtctc cagtccacaa tctttcaaaa atgccattta
5341 tgctactact gactgtattg ccactagaga attctacaaa acaagcaaaa acacatcctg
5401 agacacctca gggctgcatt cagcttacca gctacctagc aagagaagga attatttgac
5461 atgcctaaag cttacacact ctagcttagg aatccccagt ttgtggctac cctgtttcat
5521 ttccacttgt gccatcttct ttgctgaagt gttgaataag gcccacgtga agagtttggt
5581 agaaatagcc ttgtcaagag aactagcaag cccctgacat ttttttctaa gagtgtttat
5641 gggatgagat gtgctacaaa tgggatagat ttggataaaa ttttaactca acatcttgat
5701 ttggagcctg gggtttcggg aaggtgttga ggaatctata gaagtccaaa ttataggttg
5761 tattcttcca tcttcattgt cttacctctg aaggaataga acctgaccac attattatga
5821 aacattatgg ctgtttatgt aatttaggga ggactggtct gtaatttctg aatgtatata
5881 gaataatatt tatgtttaca atgtaacttt tcaaaattta caaatcagga ttatatacat
5941 aagaattcca ctaagaaatg ccaagattct taaatttgcc agcgttaaag tagaaaataa
6001 catttcagaa gagcacaata tgcataaaac atttttcaaa attgaaatat tttcctgggc
6061 attaaaaacc tttactattg gctacaaatt tattgtacct gatgaaaaca tattttctgg
6121 acttaaatgt tattacaaat atcttaattt tcagtaattg ttttgcactt tcaaagattg
6181 taaatagttc attcaatcaa tggtatagag ttatttattt gctacataat agatactgtg
6241 ccaaataatt actttttatt tattttattt agtacgtaat tttgaagtac attttttcct
6301 gttttcacaa ttagactaca tttaatgtgt aggaattgta tgtatgtata tcttctgtaa
6361 ataacatcta gtatcttcac taaatataat tgtcgacaag
//