LOCUS AB039606 801 bp DNA linear BCT 09-JAN-2009 DEFINITION Pseudomonas alcaligenes rpoD gene for DNA-directed RNA polymerase subunit D, partial cds, strain: IFO 14159. ACCESSION AB039606 VERSION AB039606.1 KEYWORDS . SOURCE Pseudomonas alcaligenes ORGANISM Pseudomonas alcaligenes Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas. REFERENCE 1 (bases 1 to 801) AUTHORS Yamamoto,S. TITLE Direct Submission JOURNAL Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases. Contact:Satoshi Yamamoto Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1, Heita, Kamaishi, Iwate 026-0001, Japan URL :http://www.mbio.co.jp/ REFERENCE 2 AUTHORS Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and Harayama,S. TITLE Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes JOURNAL Microbiology 146, 2385-2394 (2000) COMMENT FEATURES Location/Qualifiers source 1..801 /clone="RD10190.icb" /db_xref="taxon:43263" /mol_type="genomic DNA" /organism="Pseudomonas alcaligenes" /strain="IFO 14159" CDS <1..>801 /codon_start=1 /EC_number="2.7.7.6" /gene="rpoD" /product="DNA-directed RNA polymerase subunit D" /protein_id="BAB17576.1" /transl_table=11 /translation="VELLTREGEIEIAKRIEEGIREVMGAISLFPGTVDSILAEYQRV TTEGGRLSDVLSGYIDPDDGSLPAEEVVPELKEATAEAKDDEEEEEEGDSDSDDEGDG GPDPEEAARRFGAVAEQLDKARKALKKHGRGSKQAEKEQQALAELFMPIKLVPKQFDA LVERVRGSLEQVRAQERAIMQLCVRDARMPRADFLKLFPGNEVATDWAAGLAKGKAKY AEAIGNLLADIQRCQEKMAAIEADAGLVIAEIKDINRRMSIGEAKARRA" BASE COUNT 172 a 266 c 266 g 97 t ORIGIN 1 gttgagctgc tgacccgcga aggcgagatc gaaatcgcca agcgtatcga ggaaggcatc 61 cgcgaggtca tgggggccat ctccctgttc cccggcaccg tcgacagcat cctcgccgaa 121 taccagcgcg tcaccactga aggtggccgc ctgtccgacg tcctcagcgg ctacatcgac 181 ccggatgacg gcagcctgcc ggccgaggaa gtcgtgcccg agctgaaaga agccacggcc 241 gaagccaagg acgacgagga agaagaagag gaaggcgaca gcgactccga cgacgaaggc 301 gatggcggcc cggacccgga agaagccgcc cgccgcttcg gcgccgtcgc cgagcagctg 361 gacaaggcgc gcaaggccct gaaaaagcac ggccgcggca gcaagcaggc cgagaaggaa 421 cagcaggccc tggccgagct gttcatgccg atcaagctgg tgcccaagca gttcgatgcc 481 ctggtcgagc gcgttcgcgg ctcgctggag caggttcgcg cccaggaacg cgccatcatg 541 cagctgtgcg tacgtgacgc gcgcatgccg cgcgccgact tcctcaagct gttccccggc 601 aatgaagtcg ccaccgactg ggctgccggc ctggccaagg gcaaggccaa gtacgccgaa 661 gccatcggca acctgctggc cgatatccag cgctgccagg aaaagatggc cgccatcgag 721 gccgacgccg gcctggtgat cgccgagatc aaggacatca accgccgcat gtccatcggt 781 gaagcgaaag ctcgccgggc g //