LOCUS       AB039606                 801 bp    DNA     linear   BCT 09-JAN-2009
DEFINITION  Pseudomonas alcaligenes rpoD gene for DNA-directed RNA polymerase
            subunit D, partial cds, strain: IFO 14159.
ACCESSION   AB039606
VERSION     AB039606.1
KEYWORDS    .
SOURCE      Pseudomonas alcaligenes
  ORGANISM  Pseudomonas alcaligenes
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
            Pseudomonadaceae; Pseudomonas.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Yamamoto,S.
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAR-2000) to the DDBJ/EMBL/GenBank databases.
            Contact:Satoshi Yamamoto
            Marine Biotechnology Institute, Microbial Diversity Group; 3-75-1,
            Heita, Kamaishi, Iwate 026-0001, Japan
            URL    :http://www.mbio.co.jp/
REFERENCE   2
  AUTHORS   Yamamoto,S., Kasai,H., Arnold,D.L., Jackson,R.W., Vivian,A. and
            Harayama,S.
  TITLE     Phylogeny of the genus Pseudomonas: intrageneric structure
            reconstructed from the nucleotide sequences of gyrB and rpoD genes
  JOURNAL   Microbiology 146, 2385-2394 (2000)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..801
                     /clone="RD10190.icb"
                     /db_xref="taxon:43263"
                     /mol_type="genomic DNA"
                     /organism="Pseudomonas alcaligenes"
                     /strain="IFO 14159"
     CDS             <1..>801
                     /codon_start=1
                     /EC_number="2.7.7.6"
                     /gene="rpoD"
                     /product="DNA-directed RNA polymerase subunit D"
                     /protein_id="BAB17576.1"
                     /transl_table=11
                     /translation="VELLTREGEIEIAKRIEEGIREVMGAISLFPGTVDSILAEYQRV
                     TTEGGRLSDVLSGYIDPDDGSLPAEEVVPELKEATAEAKDDEEEEEEGDSDSDDEGDG
                     GPDPEEAARRFGAVAEQLDKARKALKKHGRGSKQAEKEQQALAELFMPIKLVPKQFDA
                     LVERVRGSLEQVRAQERAIMQLCVRDARMPRADFLKLFPGNEVATDWAAGLAKGKAKY
                     AEAIGNLLADIQRCQEKMAAIEADAGLVIAEIKDINRRMSIGEAKARRA"
BASE COUNT          172 a          266 c          266 g           97 t
ORIGIN      
        1 gttgagctgc tgacccgcga aggcgagatc gaaatcgcca agcgtatcga ggaaggcatc
       61 cgcgaggtca tgggggccat ctccctgttc cccggcaccg tcgacagcat cctcgccgaa
      121 taccagcgcg tcaccactga aggtggccgc ctgtccgacg tcctcagcgg ctacatcgac
      181 ccggatgacg gcagcctgcc ggccgaggaa gtcgtgcccg agctgaaaga agccacggcc
      241 gaagccaagg acgacgagga agaagaagag gaaggcgaca gcgactccga cgacgaaggc
      301 gatggcggcc cggacccgga agaagccgcc cgccgcttcg gcgccgtcgc cgagcagctg
      361 gacaaggcgc gcaaggccct gaaaaagcac ggccgcggca gcaagcaggc cgagaaggaa
      421 cagcaggccc tggccgagct gttcatgccg atcaagctgg tgcccaagca gttcgatgcc
      481 ctggtcgagc gcgttcgcgg ctcgctggag caggttcgcg cccaggaacg cgccatcatg
      541 cagctgtgcg tacgtgacgc gcgcatgccg cgcgccgact tcctcaagct gttccccggc
      601 aatgaagtcg ccaccgactg ggctgccggc ctggccaagg gcaaggccaa gtacgccgaa
      661 gccatcggca acctgctggc cgatatccag cgctgccagg aaaagatggc cgccatcgag
      721 gccgacgccg gcctggtgat cgccgagatc aaggacatca accgccgcat gtccatcggt
      781 gaagcgaaag ctcgccgggc g
//