LOCUS AK106534 1627 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-108-B04, full insert sequence. ACCESSION AK106534 VERSION AK106534.1 KEYWORDS oligo capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1627) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (27-AUG-2002) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1627 /clone="002-108-B04" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1627 /db_xref="Osa1:LOC_Os02g34850" /note="(Rice Genome Annotation Project) histone-lysine N-methyltransferase, H3 lysine-4 and H3 lysine-36specific ASHH2, expressed" /note="mapping to R02-TIGRv4S1-000829F (Chr.2: short arm=20899904, long arm=20904608, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 474 a 319 c 390 g 444 t ORIGIN 1 tgaatccatc atcagctcct attgacagtg agcacatttt gggagttgaa ggaagattga 61 acagcttgct tgatgtaaat ggaggtatta gcaaacgaaa agacgcaaca aatggatact 121 tgaagcttct ccttgtgact gcagcggaag gtgacaatgc tgggggcacg tctaaaagtg 181 taagggatct ttcgttaatt cttgatgcac ttctgaaaac aagatccaat tctgtcctgt 241 tggatatcat caataagaat ggactgcaaa tgcttcacaa tatattaaag cagaataaaa 301 gcgatttcca taggatacct ataataagaa agcttgtgaa ggtacttgag tttctagctt 361 ccaagggcat tctgacatct gaacatataa atggtggtcc tcgatgtgct gggacagaaa 421 gcttcaggga gtcgatgttg ggcttgttaa ggcataatga tatgcaggtt caacagattg 481 ctcggaactt tcgtgataga tggatccaat gggcccctcg aaatatttca agaaatgagc 541 caacagaata ttcacgtgca tccatatctg cacacgatat tcatgtcatt tcaacagctg 601 gtggatcttt tccaacttca gccaacacta tggattggaa atccatcaga agaaaacgca 661 agagccgttg ggattaccaa ccagatgacc actataaaat gggtggcctg aaaattcaga 721 aagtttgtcc tgtacaaagt gagtttcgga ctggctcggt gggaaataag ttgcatggta 781 attggggaac gaacagctcc cacaatgatg ttcctgtggt gggaagttca gccgatggtg 841 cagatgatga agcacctcct ggatttgagt ctcagcagga aagtcggcct ggacaagctt 901 gtttagaatc gggggtttct ccaggattat acttggagag gtatcaacat aacttgacta 961 tttcatacgg gattccaatc gcttttgttg agcattttgg aaccccagaa gttgaaggag 1021 ggccatgtcg caaaaactgg aaagtcgcac ctggtgtgcc tttccagccc tttccaccat 1081 tgccgcccta tccaagaggg agtccttgtc cttccactca gatgtctcag catgaacaca 1141 acagtttggg acattgtggc agggctgcaa atagagacgg gagaatacat aggaattgga 1201 gaaatggggc gagaacaaaa tttccataca atcatcaagg acggagattt cctaacaata 1261 atcaaagatt ttgaaagttg cctgctgcct ccaacgtctc aggagcaggg tgatccagga 1321 cctagaggca gggagtgacc caagtcctgg tttttgaacc tcaaatagtg gtttatacat 1381 tgtagttcct gtttatcaga gccccagagg tgtatcagaa ttgcgtgcgc ccgtaattct 1441 atttaatagg agcagatgtt actgtcagtt tattagaggt agaaacatat tctgcaaata 1501 ggtcattgcc tttgcggttc ttttactaat taatttgccc attggctccc tctgcgctat 1561 gtgtaatccc ataggaataa ttgatttgat tcaaatcgtt ttacaggcaa aacggctaat 1621 tggtttc //