LOCUS       SIU01567.1              1205 aa    PRT              BCT 25-MAY-2020
DEFINITION  Mycobacterium tuberculosis variant bovis AF2122/97 PROBABLE
            CHROMOSOME PARTITION PROTEIN SMC protein.
ACCESSION   LT708304-2981
PROTEIN_ID  SIU01567.1
SOURCE      Mycobacterium tuberculosis variant bovis AF2122/97
  ORGANISM  Mycobacterium tuberculosis variant bovis AF2122/97
            Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
            Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE   1
  AUTHORS   Malone K.M.
  JOURNAL   Submitted (06-DEC-2016) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine, University College
            Dublin, D4, Ireland
REFERENCE   2
  AUTHORS   Malone M K., Farrell D., Malone K.
  JOURNAL   Submitted (15-APR-2020) to the INSDC. School of Veterinary
            Medicine, Tuberculosis Molecular Microbiology Research Group,
            University College Dublin, Tuberculosis Molecular Microbiology
            Research Group, School of Veterinary Medicine,, University College
            Dublin, D4, Ireland
FEATURES             Qualifiers
     source          /organism="Mycobacterium tuberculosis variant bovis
                     AF2122/97"
                     /chromosome="Mycobacterium_bovis_AF212297"
                     /isolate="AF2122/97"
                     /mol_type="genomic DNA"
                     /isolation_source="Mycobacterium bovis subsp. bovis strain
                     AF2122/97. This strain is a fully virulent strain that was
                     isolated in 1997 in the UK from a cow suffering necrotic
                     lesions in lung and bronchomediastinal lymph nodes. The
                     strain was also reported to infect and persist in badgers
                     that are considered to be a significant source of bovine
                     infection."
                     /db_xref="taxon:233413"
     protein         /transl_table=11
                     /gene="smc"
                     /locus_tag="BQ2027_MB2946C"
                     /note="Mb2946c, smc, len: 1205 aa. Equivalent to Rv2922c,
                     len: 1205 aa, from Mycobacterium tuberculosis strain
                     H37Rv, (99.8% identity in 1205 aa overlap). Probable smc,
                     chromosome partition protein (ala-, arg-, leu-, glu-rich
                     protein, possibly coiled-coil protein) (see * below),
                     equivalent (but longer 84 aa) to
                     Q9CBT5|SMC|ML1629|MLCB250.01 POSSIBLE CELL DIVISION
                     PROTEIN from Mycobacterium leprae (1203 aa), FASTA scores:
                     opt: 5957, E(): 0, (79.15% identity in 1205 aa overlap).
                     Also highly similar to other chromosome segregation
                     proteins e.g. Q9ZBQ2|SC7A1.21 PUTATIVE CHROMOSOME
                     ASSOCIATED PROTEIN from Streptomyces coelicolor (1186 aa),
                     FASTA scores: opt: 2633, E(): 4.1e-120, (53.03% identity
                     in 1205 aa overlap); P51834|SMC_BACSU CHROMOSOME PARTITION
                     PROTEIN from Bacillus subtilis (1186 aa), FASTA scores:
                     opt: 1009, E(): 2.1e-41, (30.75% identity in 1205 aa
                     overlap); Q9CHC9|SMC CHROMOSOME SEGREGATION PROTEIN from
                     Lactococcus lactis (subsp. lactis) (Streptococcus lactis)
                     (924 aa), FASTA scores: opt: 996, E(): 7.5e-41, (29.75%
                     identity in 874 aa overlap); etc. Equivalent to AAK47317
                     from Mycobacterium tuberculosis strain CDC1551 (1205 aa)
                     but longer 84 aa. Contains PS00017 ATP/GTP-binding site
                     motif A (P-loop). BELONGS TO THE SMC FAMILY. N-terminus
                     shortened since first submission. [*Note: Cobbe N., Heck
                     M.M.S.- Phylogenetic analysis of SMC proteins (OCT-2001)].
                     Protein product from Mb2946c detected using shotgun mass
                     spectrometry and SWATH mass spectrometry. Mb2946c found to
                     be expressed during exponential growth in Sauton's minimal
                     media by RNA-sequencing."
                     /db_xref="GOA:A0A1R3Y2R1"
                     /db_xref="InterPro:IPR003395"
                     /db_xref="InterPro:IPR010935"
                     /db_xref="InterPro:IPR011890"
                     /db_xref="InterPro:IPR024704"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR036277"
                     /db_xref="UniProtKB/TrEMBL:A0A1R3Y2R1"
BEGIN
        1 MYLKSLTLKG FKSFAAPTTL RFEPGITAVV GPNGSGKSNV VDALAWVMGE QGAKTLRGGK
       61 MEDVIFAGTS SRAPLGRAEV TVSIDNSDNA LPIEYTEVSI TRRMFRDGAS EYEINGSSCR
      121 LMDVQELLSD SGIGREMHVI VGQGKLEEIL QSRPEDRRAF IEEAAGVLKH RKRKEKALRK
      181 LDTMAANLAR LTDLTTELRR QLKPLGRQAE AAQRAAAIQA DLRDARLRLA ADDLVSRRAE
      241 REAVFQAEAA MRREHDEAAA RLAVASEELA AHESAVAELS TRAESIQHTW FGLSALAERV
      301 DATVRIASER AHHLDIEPVA VSDTDPRKPE ELEAEAQQVA VAEQQLLAEL DAARARLDAA
      361 RAERADRERR AAEADRAHLA AVREEADRRE GLARLAGQVE TMRARVESID ESVARLSERI
      421 EDAAMRAQQT RAEFETVQGR IGELDQGEVG LDEHHERTVA ALRLADERVA ELQSAERAAE
      481 RQVASLRARI DALAVGLQRK DGAAWLAHNR SGAGLFGSIA QLVKVRSGYE AALAAALGPA
      541 ADALAVDGLT AAGSAVSALK QADGGRAVLV LSDWPAPQAP QSASGEMLPS GAQWALDLVE
      601 SPPQLVGAMI AMLSGVAVVN DLTEAMGLVE IRPELRAVTV DGDLVGAGWV SGGSDRKLST
      661 LEVTSEIDKA RSELAAAEAL AAQLNAALAG ALTEQSAGQD AAEQALAALN ESDTAISAMY
      721 EQLGRLGQEA RAAEEEWNRL LQQRTEQEAV RTQTLDDVIQ LETQLRKAQE TQRVQVAQPI
      781 DRQAISAAAD RARGVEVEAR LAVRTAEERA NAVRGRADSL RRAAAAEREA RVRAQQARAA
      841 RLHAAAVAAA VADCGRLLAG RLHRAVDGAS QLRDASAAQR QQRLAAMAAV RDEVNTLSAR
      901 VGELTDSLHR DELANAQAAL RIEQLEQMVL EQFGMAPADL ITEYGPHVAL PPTELEMAEF
      961 EQARERGEQV IAPAPMPFDR VTQERRAKRA ERALAELGRV NPLALEEFAA LEERYNFLST
     1021 QLEDVKAARK DLLGVVADVD ARILQVFNDA FVDVEREFRG VFTALFPGGE GRLRLTEPDD
     1081 MLTTGIEVEA RPPGKKITRL SLLSGGEKAL TAVAMLVAIF RARPSPFYIM DEVEAALDDV
     1141 NLRRLLSLFE QLREQSQIII ITHQKPTMEV ADALYGVTMQ NDGITAVISQ RMRGQQVDQL
     1201 VTNSS
//