LOCUS RID49382.1 1058 aa PRT CON 13-SEP-2018
DEFINITION Brassica rapa hypothetical protein protein.
ACCESSION CM010635-197
PROTEIN_ID RID49382.1
SOURCE Brassica rapa (field mustard)
ORGANISM Brassica rapa
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Brassiceae; Brassica.
REFERENCE 1 (bases 1 to 23189089)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE WGS assembly of Brassica rapa FPsc
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 23189089)
AUTHORS Bowman,J., Kohchi,T., Yamato,K., Jenkins,J., Shu,S., Ishizaki,K.,
Yamaoka,S., Nishihama,R., Nakamura,Y., Berger,F., Adam,C., Aki,S.,
Althoff,F., Araki,T., Arteaga-Vazquez,M., Balasubrmanian,S.,
Bauer,D., Boehm,C., Briginshaw,L., Caballero-Perez,J., Catarino,B.,
Chen,F., Chiyoda,S., Chovatia,M., Davies,K., Delmans,M., Demura,T.,
Dierschke,T., Dolan,L., Dorantes-Acosta,A., Eklund,D., Florent,S.,
Flores-Sandoval,E., Fujiyama,A., Fukuzawa,H., Galik,B.,
Grimanelli,D., Grimwood,J., Grossniklaus,U., Hamada,T.,
Haseloff,J., Hetherington,A., Higo,A., Hirakawa,Y., Hundley,H.,
Ikeda,Y., Inoue,K., Inoue,S., Ishida,S., Jia,Q., Kakita,M.,
Kanazawa,T., Kawai,Y., Kawashima,T., Kennedy,M., Kinose,K.,
Kinoshita,T., Kohara,Y., Koide,E., Komatsu,K., Kopischke,S.,
Kubo,M., Kyozuka,J., Lagercrantz,U., Lin,S., Lindquist,E.,
Lipzen,A., Lu,C., Luna,E., Martienssen,R., Minamino,N.,
Mizutani,M., Mizutani,M., Mochizuki,N., Monte,I., Mosher,R.,
Nagasaki,H., Nakagami,H., Naramoto,S., Nishitani,K., Ohtani,M.,
Okamoto,T., Okumura,M., Phillips,J., Pollak,B., Reinders,A.,
Roevekamp,M., Sano,R., Sawa,S., Schmid,M., Shirakawa,M., Solano,R.,
Spunde,A., Suetsugu,N., Sugano,S., Sugiyama,A., Sun,R., Suzuki,Y.,
Takenaka,M., Takezawa,D., Tomogane,H., Tsuzuki,M., Ueda,T.,
Umeda,M., Ward,J., Watanabe,Y., Yazaki,K., Yokoyama,R.,
Yoshitake,Y., Yotsui,I., Zachgo,S. and Schmutz,J.
TITLE Direct Submission
JOURNAL Submitted (22-JUN-2018) US DOE Joint Genome Institute, 400 Mitchell
Drive, Walnut Creek, CA 94598, USA
COMMENT ##Genome-Assembly-Data-START##
Assembly Method :: Meraculous v. May_2013
Assembly Name :: Brassica_rapa_FPsc_v1.3
Genome Coverage :: 155x
Sequencing Technology :: Illumina Hiseq
##Genome-Assembly-Data-END##
FEATURES Qualifiers
source /organism="Brassica rapa"
/mol_type="genomic DNA"
/cultivar="FPsc (B3)"
/db_xref="taxon:3711"
/chromosome="A8"
protein /locus_tag="BRARA_H00185"
/db_xref="Phytozome:Brara.H00185"
intron_pos 67:0 (1/5)
intron_pos 221:0 (2/5)
intron_pos 370:0 (3/5)
intron_pos 506:0 (4/5)
intron_pos 750:0 (5/5)
BEGIN
1 MNTMSEKVGA VGGNKGGPFD DGVFDGVKKI IVGKDFNSVS YIKIEYEKDG KFETREHGTI
61 RGELQEFTVD YPNEYITSVG GSYELVLCYG TVLIRSLIFK TSYKRTSPIF GRTTLFGHPA
121 GREFMLEGKN GGKLLGFHGR SGQALDAIGA HFFSVKSPLK HFNLQGGNGG SAWDDGAYDG
181 VRKILVGRGS KFVSYVRFEY AKGQGMVPHA HGKKQEAPQE FVVDYPNEQI TLVEGTIDGY
241 LTSLRFKTSK GRTSPVFGNV VGRKFVFEEK DFKLVGFCGR SGDAIDALGA HFAPLPPPPP
301 APTPDPATSK MGPLGGDKGN TFDDGVLDGV KKVTIGADEY SVTYIKIEYA NDGNVEIREH
361 GTNRGELKEF SVAYPNEYIT AVGGSYKHIF NYDTTLITSL YFTTSKGLTS PLFGEIKGRE
421 FEYKDENGGN LVGFHGRGGY AIDAIGVHFA PAPNSSIPTP PNKLSKVYIT SGNEGIEEIN
481 FYNVENGVTK EVFLHGVKGK NLISTLVISN PPDECLVSVE SWYSSYNVSQ GIKFKTDTNG
541 SNFFGYKFSE DTGRPFSLQV KGKKIIGVQK FPDSNLISPG TYFVLSRSSS PDKVEAIGGK
601 GGETFDDGAF NHVRKVFVGK GDSGIAYVKF DYEKDGRIVT QEHGQKTSQE TEVFEIGQDD
661 DITSVKAYYE TLDGSKTETI TYLAFKTLKG INSQPFGKTP VIVNENTKLS LLEGGKITGF
721 HGSSTDVLHS IGAYISASPP TMLHGKWIQV EQNGKTPGPR CSHAIAMVGN KMYSFGGELK
781 PNFHIDRDLY FFDFETRRWS IADPDGDVPE LPCLGVCMVA IGTTLYVFGG RDGFRNYNGF
841 YSYDTVKSEW KLITHVNNGP APRSFHSMAA DGNNIYIFGG VTTKERVNTL HAYNIVDQKW
901 TELPNPGESC KGRGGAGLVV VQGKIWVVYG FIGEEVEDVH CFDPVESKWT KVETRGEKPW
961 ARSVFALAVV GKYIIISGGE IEMDVKAHLG PGSLTGGAFV LDTESLVWEK LEEGHSPRGW
1021 IASTTASIDG KKGLLMYGGK APTNGRYEDI YFYGVDSA
//