LOCUS CCP46391.1 300 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv 3,4-DHSA dioxygenase protein.
ACCESSION AL123456-3669
PROTEIN_ID CCP46391.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="hsaC"
/gene_synonym="bphC"
/locus_tag="Rv3568c"
/note="Rv3568c, (MTCY06G11.15c), len: 300 aa. HsaC, highly
similar to e.g. Q9KWQ5|BPHC5 from Rhodococcus sp. RHA1
(300 aa), FASTA scores: opt: 1715, E(): 3.8e-103, (82.15%
identity in 297 aa overlap); O50479|EDOB from Rhodococcus
rhodochrous (300 aa) FASTA scores: opt: 1714, E():
4.4e-103, (82.5% identity in 297 aa overlap); O69359|BPHC6
from Rhodococcus erythropolis (300 aa), FASTA scores: opt:
1647, E(): 9.1e-99, (78.25% identity in 299 aa overlap);
Q9RBT2|BPHC1 from Pseudomonas sp. SY5 (301 aa) Pseudomonas
sp. SY5 (298 aa) FASTA scores: opt: 767, E():
3.9e-42,(42.8% identity in 299 aa overlap);
P47228|BPHC_BURCE from Burkholderia cepacia (Pseudomonas
cepacia) (297 aa), FASTA scores: opt: 670, E(): 6.8e-36,
(40.55% identity in 296 aa overlap); etc. Contains PS00082
Extradiol ring-cleavage dioxygenases signature. Belongs to
the extradiol ring-cleavage dioxygenase family."
/db_xref="EnsemblGenomes-Gn:Rv3568c"
/db_xref="EnsemblGenomes-Tr:CCP46391"
/db_xref="GOA:P9WNW7"
/db_xref="InterPro:IPR000486"
/db_xref="InterPro:IPR004360"
/db_xref="InterPro:IPR029068"
/db_xref="InterPro:IPR037523"
/db_xref="PDB:2ZI8"
/db_xref="PDB:2ZYQ"
/db_xref="UniProtKB/Swiss-Prot:P9WNW7"
/inference="protein motif:PROSITE:PS00082"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MSIRSLGYLR IEATDMAAWR EYGLKVLGMV EGKGAPEGAL YLRMDDFPAR LVVVPGEHDR
61 LLEAGWECAN AEGLQEIRNR LDLEGTPYKE ATAAELADRR VDEMIRFADP SGNCLEVFHG
121 TALEHRRVVS PYGHRFVTGE QGMGHVVLST RDDAEALHFY RDVLGFRLRD SMRLPPQMVG
181 RPADGPPAWL RFFGCNPRHH SLAFLPMPTS SGIVHLMVEV EQADDVGLCL DRALRRKVPM
241 SATLGRHVND LMLSFYMKTP GGFDIEFGCE GRQVDDRDWI ARESTAVSLW GHDFTVGARG
//