LOCUS CCP45702.1 779 aa PRT BCT 27-FEB-2015
DEFINITION Mycobacterium tuberculosis H37Rv Possible formate dehydrogenase
H FdhF (formate-hydrogen-lyase-linked, selenocysteine-
containing polypeptide) (formate dehydrogenase-H alpha
subunit) (FDH-H) protein.
ACCESSION AL123456-2980
PROTEIN_ID CCP45702.1
SOURCE Mycobacterium tuberculosis H37Rv
ORGANISM Mycobacterium tuberculosis H37Rv
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae;
Mycobacterium; Mycobacterium tuberculosis complex.
REFERENCE 1
AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C.,
Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III.,
Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T.,
Connor R., Davies R., Devlin K., Feltwell T., Gentles S.,
Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J.,
Moule S., Murphy L., Oliver K., Osborne J., Quail M.A.,
Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J.,
Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S.,
Barrell B.G.
TITLE Deciphering the biology of Mycobacterium tuberculosis from the
complete genome sequence
JOURNAL Nature 393(6685), 537-544(1998).
PUBMED 9634230
REMARK Erratum:[Nature 1998 Nov 12;396(6707):190]
REFERENCE 2
AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T.
TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis
H37Rv
JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002).
PUBMED 12368430
REFERENCE 3
AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T.
TITLE TubercuList--10 years after
JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011).
PUBMED 20980199
REFERENCE 4 (bases 1 to 4411529)
AUTHORS Parkhill J.
JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the
Mycobacterium tuberculosis sequencing and mapping teams, Sanger
Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA
Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28
rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail:
parkhill@sanger.ac.uk
REFERENCE 5 (bases 1 to 4411532)
AUTHORS Lew J.M.
JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique
Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss
Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva
4, SWITZERLAND
COMMENT On or before Feb 1, 2013 this sequence version replaced
gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250,
gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756,
gi:38490319, gi:41352785, gi:38490370, gi:41353971.
Note:
This annotation is from the TubercuList website, Release 26, Dec
2012 (URL: http://tuberculist.epfl.ch) (email:
tuberculist@epfl.ch).
FEATURES Qualifiers
source /organism="Mycobacterium tuberculosis H37Rv"
/strain="H37Rv"
/mol_type="genomic DNA"
/db_xref="taxon:83332"
protein /transl_table=11
/gene="fdhF"
/locus_tag="Rv2900c"
/note="Rv2900c, (MTCY274.31c), len: 779 aa. Possible
fdhF,formate dehydrogenase, highly similar to others
formate dehydrogenases and prokaryotic
molybdopterin-containing oxidoreductases e.g.
Q9S2J9|SC7H2.18 putative formate dehydrogenase from
Streptomyces coelicolor (759 aa), FASTA scores: opt: 3038,
E(): 2.7e-180, (59.7% identity in 767 aa overlap);
Q9HU08|PA5181 probable oxidoreductase from Pseudomonas
aeruginosa (773 aa), FASTA scores: opt: 2560,E():
1.1e-150, (53.2% identity in 761 aa overlap); P78160
formate dehydrogenase a chain (fragment) from Escherichia
coli strain K12 (740 aa), FASTA scores: opt: 2002, E():
3.7e-116, (43.1% identity in 733 aa overlap);
P07658|FDHF_ECOLI|P78137|B4079 formate dehydrogenase from
Escherichia coli strain K12 (715 aa), FASTA scores: opt:
305, E(): 5.6e-13, (25.5% identity in 748 aa overlap);
etc. Belongs to the prokaryotic molybdopterin-containing
oxidoreductase family."
/db_xref="EnsemblGenomes-Gn:Rv2900c"
/db_xref="EnsemblGenomes-Tr:CCP45702"
/db_xref="GOA:P9WJP9"
/db_xref="InterPro:IPR006656"
/db_xref="InterPro:IPR006657"
/db_xref="InterPro:IPR009010"
/db_xref="InterPro:IPR010046"
/db_xref="InterPro:IPR037951"
/db_xref="InterPro:IPR041953"
/db_xref="UniProtKB/Swiss-Prot:P9WJP9"
/experiment="EXISTENCE: identified in proteomics study"
BEGIN
1 MYVEAVRWQR SAASRDVLAD YDEQAVTVAP RKREAAGVRA VMVSLQRGMQ QMGALRTAAA
61 LARLNQRNGF DCPGCAWPEE PGGRKLAEFC ENGAKAVAEE ATKRTVTAEF FARHSVAELS
121 AKPEYWLSQQ GRLAHPMVLR PGDDHYRPIS WDAAYQLIAE QLNGLDSPDR AVFYTSGRTS
181 NEAAFCYQLL VRSFGTNNLP DCSNMCHESS GAALTDSIGI GKGSVTIGDV EHADLIVIAG
241 QNPGTNHPRM LSVLGKAKAN GAKIIAVNPL PEAGLIRFKD PQKVNGVVGH GIPIADEFVQ
301 IRLGGDMALF AGLGRLLLEA EERVPGSVVD RSFVDNHCAG FDGYRRRTLQ VGLDTVMDAT
361 GIELAQLQRV AAMLMASQRT VICWAMGLTQ HAHAVATIGE VTNVLLLRGM IGKPGAGVCP
421 VRGHSNVQGD RTMGIWEKMP EQFLAALDRE FGITSPRAHG FDTVAAIRAM RDGRVSVFMG
481 MGGNFASATP DTAVTEAALR RCALTVQVST KLNRSHLVHG ATALILPTLG RTDRDTRNGR
541 KQLVSVEDSM SMVHLSRGSL HPPSDQVRSE VQIICQLARA LFGPGHPVPW ERFADDYDTI
601 RDAIAAVVPG CDDYNHKVRV PDGFQLPHPP RDAREFRTST GKANFAVNPL QWVPVPPGRL
661 VLQTLRSHDQ YNTTIYGLDD RYRGVKGGRR VVFINPADIE TFGLTAGDRV DLVSEWTDGQ
721 GGLQERRAKD FLVVAYSTPV GNAAAYYPET NPLVPLDHTA AQSNTPVSKA IIVRLEPTA
//