LOCUS CCP45702.1 779 aa PRT BCT 27-FEB-2015 DEFINITION Mycobacterium tuberculosis H37Rv Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine- containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H) protein. ACCESSION AL123456-2980 PROTEIN_ID CCP45702.1 SOURCE Mycobacterium tuberculosis H37Rv ORGANISM Mycobacterium tuberculosis H37Rv Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex. REFERENCE 1 AUTHORS Cole S.T., Brosch R., Parkhill J., Garnier T., Churcher C., Harris D., Gordon S.V., Eiglmeier K., Gas S., Barry C.E.III., Tekaia F., Badcock K., Basham D., Brown D., Chillingworth T., Connor R., Davies R., Devlin K., Feltwell T., Gentles S., Hamlin N., Holroyd S., Hornsby T., Jagels K., Krogh A., McLean J., Moule S., Murphy L., Oliver K., Osborne J., Quail M.A., Rajandream M.A., Rogers J., Rutter S., Seeger K., Skelton J., Squares R., Squares S., Sulston J.E., Taylor K., Whitehead S., Barrell B.G. TITLE Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence JOURNAL Nature 393(6685), 537-544(1998). PUBMED 9634230 REMARK Erratum:[Nature 1998 Nov 12;396(6707):190] REFERENCE 2 AUTHORS Camus J.C., Pryor M.J., Medigue C., Cole S.T. TITLE Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv JOURNAL Microbiology (Reading, Engl.) 148(Pt 10), 2967-2973(2002). PUBMED 12368430 REFERENCE 3 AUTHORS Lew J.M., Kapopoulou A., Jones L.M., Cole S.T. TITLE TubercuList--10 years after JOURNAL Tuberculosis (Edinb) 91(1), 1-7(2011). PUBMED 20980199 REFERENCE 4 (bases 1 to 4411529) AUTHORS Parkhill J. JOURNAL Submitted (11-JUN-1998) to the INSDC. Submitted on behalf of the Mycobacterium tuberculosis sequencing and mapping teams, Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA Unite de Genetique Moleculaire Bacterienne, Institut Pasteur, 28 rue du Docteur Roux, 75724 Paris Cedex 15, France E-mail: parkhill@sanger.ac.uk REFERENCE 5 (bases 1 to 4411532) AUTHORS Lew J.M. JOURNAL Submitted (18-DEC-2012) to the INSDC. Lew J., Ecole Polytechnique Federale de Lausanne, CH-1015, Lausanne, Switzerland, and the Swiss Institute of Bioinformatics, CMU - Rue Michel-Servet 1, 1211 Geneva 4, SWITZERLAND COMMENT On or before Feb 1, 2013 this sequence version replaced gi:41352722, gi:38490165, gi:38490207, gi:41353619, gi:38490250, gi:38684030, gi:38490288, gi:41353667, gi:41353422, gi:41352756, gi:38490319, gi:41352785, gi:38490370, gi:41353971. Note: This annotation is from the TubercuList website, Release 26, Dec 2012 (URL: http://tuberculist.epfl.ch) (email: tuberculist@epfl.ch). FEATURES Qualifiers source /organism="Mycobacterium tuberculosis H37Rv" /strain="H37Rv" /mol_type="genomic DNA" /db_xref="taxon:83332" protein /transl_table=11 /gene="fdhF" /locus_tag="Rv2900c" /note="Rv2900c, (MTCY274.31c), len: 779 aa. Possible fdhF,formate dehydrogenase, highly similar to others formate dehydrogenases and prokaryotic molybdopterin-containing oxidoreductases e.g. Q9S2J9|SC7H2.18 putative formate dehydrogenase from Streptomyces coelicolor (759 aa), FASTA scores: opt: 3038, E(): 2.7e-180, (59.7% identity in 767 aa overlap); Q9HU08|PA5181 probable oxidoreductase from Pseudomonas aeruginosa (773 aa), FASTA scores: opt: 2560,E(): 1.1e-150, (53.2% identity in 761 aa overlap); P78160 formate dehydrogenase a chain (fragment) from Escherichia coli strain K12 (740 aa), FASTA scores: opt: 2002, E(): 3.7e-116, (43.1% identity in 733 aa overlap); P07658|FDHF_ECOLI|P78137|B4079 formate dehydrogenase from Escherichia coli strain K12 (715 aa), FASTA scores: opt: 305, E(): 5.6e-13, (25.5% identity in 748 aa overlap); etc. Belongs to the prokaryotic molybdopterin-containing oxidoreductase family." /db_xref="EnsemblGenomes-Gn:Rv2900c" /db_xref="EnsemblGenomes-Tr:CCP45702" /db_xref="GOA:P9WJP9" /db_xref="InterPro:IPR006656" /db_xref="InterPro:IPR006657" /db_xref="InterPro:IPR009010" /db_xref="InterPro:IPR010046" /db_xref="InterPro:IPR037951" /db_xref="InterPro:IPR041953" /db_xref="UniProtKB/Swiss-Prot:P9WJP9" /experiment="EXISTENCE: identified in proteomics study" BEGIN 1 MYVEAVRWQR SAASRDVLAD YDEQAVTVAP RKREAAGVRA VMVSLQRGMQ QMGALRTAAA 61 LARLNQRNGF DCPGCAWPEE PGGRKLAEFC ENGAKAVAEE ATKRTVTAEF FARHSVAELS 121 AKPEYWLSQQ GRLAHPMVLR PGDDHYRPIS WDAAYQLIAE QLNGLDSPDR AVFYTSGRTS 181 NEAAFCYQLL VRSFGTNNLP DCSNMCHESS GAALTDSIGI GKGSVTIGDV EHADLIVIAG 241 QNPGTNHPRM LSVLGKAKAN GAKIIAVNPL PEAGLIRFKD PQKVNGVVGH GIPIADEFVQ 301 IRLGGDMALF AGLGRLLLEA EERVPGSVVD RSFVDNHCAG FDGYRRRTLQ VGLDTVMDAT 361 GIELAQLQRV AAMLMASQRT VICWAMGLTQ HAHAVATIGE VTNVLLLRGM IGKPGAGVCP 421 VRGHSNVQGD RTMGIWEKMP EQFLAALDRE FGITSPRAHG FDTVAAIRAM RDGRVSVFMG 481 MGGNFASATP DTAVTEAALR RCALTVQVST KLNRSHLVHG ATALILPTLG RTDRDTRNGR 541 KQLVSVEDSM SMVHLSRGSL HPPSDQVRSE VQIICQLARA LFGPGHPVPW ERFADDYDTI 601 RDAIAAVVPG CDDYNHKVRV PDGFQLPHPP RDAREFRTST GKANFAVNPL QWVPVPPGRL 661 VLQTLRSHDQ YNTTIYGLDD RYRGVKGGRR VVFINPADIE TFGLTAGDRV DLVSEWTDGQ 721 GGLQERRAKD FLVVAYSTPV GNAAAYYPET NPLVPLDHTA AQSNTPVSKA IIVRLEPTA //