LOCUS ASM98744.1 4700 aa PRT BCT 14-AUG-2017
DEFINITION Vibrio vulnificus NBRC 15645 = ATCC 27562 RTX toxin protein.
ACCESSION CP012882-910
PROTEIN_ID ASM98744.1
SOURCE Vibrio vulnificus NBRC 15645 = ATCC 27562
ORGANISM Vibrio vulnificus NBRC 15645 = ATCC 27562
Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales;
Vibrionaceae; Vibrio.
REFERENCE 1 (bases 1 to 1741042)
AUTHORS Rowe-Magnus,D. and Rusch,D.B.
TITLE Direct Submission
JOURNAL Submitted (06-OCT-2015) Biology, Indiana University, 1001 E. Third
Street, Bloomington, IN 47405, USA
COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation
Pipeline (released 2013). Information about the Pipeline can be
found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
##Genome-Assembly-Data-START##
Assembly Method :: Celera Assembler v. 8.1
Genome Coverage :: 10x; 100x
Sequencing Technology :: PacBio; Illumina
##Genome-Assembly-Data-END##
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Date :: 10/06/2015 12:48:27
Annotation Pipeline :: NCBI Prokaryotic Genome Annotation
Pipeline
Annotation Method :: Best-placed reference protein set;
GeneMarkS+
Annotation Software revision :: 3.0
Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA;
repeat_region
Genes :: 4,415
CDS :: 4,220
Pseudo Genes :: 45
rRNAs :: 12, 11, 11 (5S, 16S, 23S)
complete rRNAs :: 12, 11, 11 (5S, 16S, 23S)
tRNAs :: 115
ncRNA :: 1
##Genome-Annotation-Data-END##
FEATURES Qualifiers
source /organism="Vibrio vulnificus NBRC 15645 = ATCC 27562"
/mol_type="genomic DNA"
/strain="ATCC 27562"
/type_material="type strain of Vibrio vulnificus"
/db_xref="taxon:1219061"
/chromosome="2"
/country="USA"
/collection_date="1979"
protein /locus_tag="AOT11_04645"
/inference="EXISTENCE: similar to AA
sequence:RefSeq:WP_017422691.1"
/note="Derived by automated computational analysis using
gene prediction method: Protein Homology."
/transl_table=11
BEGIN
1 MGKPFWRSVE YFFTGNYSAD DGNNSIVAIG FGGEIHAYGG DDHVTVGSIG ATVYTGSGND
61 TVVGGSAYLR VEDTSGHLSV KGAAGYADIN KSGDGNVSFA GAAGGVSIDH LGNHGDVNYG
121 GAAAYNGITR KGLSGNVTFK GAGGYNALWH ETNQGNLSFA GAGAGNKLDR TWFNRYQDSR
181 GDVTFDGAGA ANSISSRVET GNITFRGAGA DNHLVRKGKV GDVTLQGAGA SNRIERTRQA
241 EDVYAQTRGN IRFEGVGGYN SLYSDVAHGD IHFSGGGAYN TIIRKGSGND FAKEGMTNAK
301 ADEIVLTKAV MSGSWIGQDH HVTAVKSASE PNTYLFAFAD STYTKINKVQ LRNDPQTGEL
361 KYYSTAWYKE GNHLSNLANQ DISDNGGFTA VNINGAYTLS DLKVEHQQSL TVHAVEKDLT
421 EYEWVTYANG ALIDAKDVAL SEAKMGGTAI STDGTTVDVQ AVKSNRKPNT YVYAKVLGPY
481 TKIVVVELAN DPKTGALKYQ ARSWYKEGNH TADLANEDIS SANGYHSMGK GGYSLSDLHY
541 SVNAVRSTSE TVADIDEYTD QTLFKPATDS GESSGDVYFN GAGGGNVIKS NVTRGNVYFN
601 GGGIANVILH SSQFGNTEFN GGGAANVIVK SGEEGDLTFR GAGLANVLVH QSKQGKMDVY
661 AGGAVNVLVR IGDGQYLAHL LAYGNISVHK GNGNSRVVML GGYNTHTQIG SGNGLWLAAG
721 GFNVMTQVGK GDVASVLAGG ANVLTKVGDG DLTAGMLGGA NVITHISGDN ETSNTTAVAL
781 GGANILTKKG KGNALAVMGG GANVLTHVGD GTTTGVMVGG ANILTKVGNG DTTGIMLGVG
841 NVLTHVGDGQ TLGVMGAAGN IFTKVGDGTS IAVMIGAGNI FTHVGEGNAW ALMGGLGNVF
901 TKVGNGDALA LMVAEANVFT HIGDGMSVAL MLAKGNVATK VGNGTTLAAM VGNANIFTHV
961 GSGSTFAAMI GQANIMTKVG DDLTAALMVG KANIYTHVGD GTSLGIFAGE VNVMTKVGNG
1021 TTLAAMFGKA NIMTHVGDGL TGVLALGEAN IVTKVGDDFM GVVAAAKANV VTHVGDATTA
1081 AVLAGKGNIL TKVGEGTTVG LLISDIGNVM THVGDGTTIG IAKGKANIIT KVGDGLGVNV
1141 AWGQANVFTQ VGDGDRYNFA KGEANVITKV GDGQEVSVVQ GKANIITHVG NGDDYTGAWG
1201 KANVITKVGN GRNVVLAKGE ANIVTQVGDG DSFNALWSKG NIVTKVGDGM QVTAAKGKAN
1261 ITTTVGDGLS VTAAYGDANI NTKVGDGVSV NVAWGKYNIN TKVGDGLNVA VMKGKANANI
1321 HIGDGLGINA SYAQNNVAIK IGNGDFYSLA VASSNTSSNK LSALFDNIKQ TVLGVGGSQA
1381 INYLVQGDEA SSSGTQKGRG AIATPEITKL DGFQMDAIEE VGSDLGDSLT GSVTKVDTPD
1441 LNKMQNALDV DGSSDQTQAP NLIVNGDFEQ GDQGWKSTHG VEASYSGNVY GVNGEGHGAR
1501 VTELDTYTNT SLYQDLTDLT EGEVIAVSFD FAKRAGLSNN EGIEVLWNGE VVFSSSGDAS
1561 AWQQKTLKLT AHAGSNRIEF KGTGQNDGLG YILDNVVAKS ESSQQANAVS EHATQNQASQ
1621 NALSDKERAE ADRQRLEQEK QKQLDAVAGS QSQLESTDQQ ALENNGQAQR DAVKEESEAV
1681 TAELTKLAQG LDVLDGQATH TGESGDQWRN DFAGGLLDGV QRQLDDAKQL ANDKIAAAKQ
1741 TQSDNNSKVK ESVAKSEAGV AKGEQNRAGA EQDIADAKAD AETRQADAMA KSNDAKQAES
1801 DAHSAANDAQ SRGDRDAMNA ENKANQAQKD AKGTKQNEGD RPDREGVTGS GLSGNAHRVE
1861 GAGETGSHVT NDSQTNADGR FSEGLSEQEQ EALEGATNAV NRLQINAGIR GKNSSSTISS
1921 MFTETNSDSI VVPTAASQDV VRKEIRISGV NLEGLGEASH DTAESLVSAR AEKVANLYRW
1981 LDTDNDAATD KYVPVPGFER VDADVSDEAK ERMIQFVGGY IEHTDNQVPK DQAQALATLF
2041 VEATLDYDWD KRVEFLTKLE SYGYSFEAPH GEKSIVSFWS GRNFKEYRNV LDNAQADGKK
2101 VVYDIDVKGN AFAIDLNKQL MRWGGMFLDP DNAEQNQLKS SIDAATFSNT GFWSSVYATG
2161 AQNDVYVIAE GGMRLGNYFW NVELPALRQL QREGLVGEIR LLDKPVSAYK DIPVEDIGRR
2221 LTDAGVAVKV RFDALSHEKQ ADLLADNPDG YKADTLVELD VKLSAIDSML RESLPFYSLR
2281 TERNLLVQEG EEGFEVRSWP GTDGKSKTIL LDNPEDAAQQ KSIERFILAN FDNFEQMPDE
2341 LFLVDNKVLS HHDGRTRILA QKEDGAWTYN ANVELMSVTE LLDAAHVSGK VRGESYQQVI
2401 DALTEYHAST AEHADYELTS VEKLLNLRKQ VEGYVLGHPD SGRVQAMNAL LNQVNSRLEA
2461 VSVLVVSEQS IKAHDSFSHL YDQLDNANLK ESKHLYLDGN GDFVTKGKGN LANIDKLGGS
2521 DAVLEKVKAA VSHEYGQVVA DTIFAGLSAN DLAKDGKGID IAGLNKVHQA IEQHMSPVSA
2581 TMYIWKPSDH SALGHAALQI GQGRTQLEGQ AAADFNKQNY VSWWPLGSKS SNIRNIFNVA
2641 TEDQPDLKLR WSDFSQPAHQ NDTLEHDMAS EENDGFGLND GETKLKRFVE KLNAAKGIDA
2701 SYKDASEGYA SVLLGNPDML ASTGIPAHVF QPFVDQWNDT SYDMMDVANR FAEELQKQAQ
2761 ASGDPALVEK RIDNVVRLFA ERALEEIEAF KASQADEGRV FRINLEGLDV AAMQAEWNRL
2821 SNDPDARYQL LTKNCSSTVA KVLKAGGADK LIGHTWRPKF GVWTPTELFN FGQALQEAQL
2881 EIAAKKQSHQ ATDLLDALSG NEKRKENVAI ENDGTPPRDK ESLSPLTRFL NNELYGEKDA
2941 RRKIGEITQT LLDHAVENGE SQKVTLKGEA GRLTGYYHQG AASSKGETSA TSGKVVLFLH
3001 GSGSSAEEQA SAIRNHYQKQ GIDMLAVNLR GYGESDGGPS EKGLYQDART MFNYLVNDKG
3061 IDPSNIIIHG YSMGGPIAAD LARYAAQNGQ AVSGLLLDRP MPSMTKAITA HEVANPAGIV
3121 GAIAKAVNGQ FSVEKNLKGL PKETPILLLT DNEGLGEEGE KLRAKLAIAG YNVTGEQTFY
3181 GHEASNRLMG QYADQIVSGL FNAEQAAVEA GEVLKGLEKD FKRYGDALKP DTSVPGKAKD
3241 IRTTKDFLNG YKNDHAKDIV DGFRSDMSIK QLVDLFVKGN WSEEQKGALA WEIESRALKV
3301 TFQNKSEKYN RLFREIASAG VVDAKATEQL APQLMLLNLA NDGFGGRCDP LSKLVLVAKQ
3361 LENDGQVGVA RQLLEKMYSA AAVLSNPTLY SDSEKANASK LLSSLAAIHA KNPMHDTSMK
3421 VWQEKLEGKQ ALTVNGVVEK ITDASANGKP VLLELDAPKH AMAAWAKGSG DERVYGFYDP
3481 NAGIVEFSSA EKFSAYLTRF FGKSDLDMAQ RYELGKNAAG EPIFNRVVVM DGNTLASYKP
3541 TFGDKTTMQG ILDLPVFDAT PIKKTGTSDV DGNAKIVDVT KEALADGKIL HNQNVNDWER
3601 VVVTPTADGG ETRFDGQIIV QMENDAVAAK AAANLAGKHP ESSVVVQLDS DGNYRVVYGD
3661 PSKLDGKLRW QLVGHGRDHS ESNNTRLSGY SADELAVKLA KFQQSFNQAE NVSSKPDHIS
3721 IVGCSLVSDD KQKGFGHQFI NAMDVNGLRV DVSVRSAKVY INEMGRKLYF DGKDSWVNKA
3781 INSKVLLSWN GQGEVVAKDE RIRNGIAEGD IDLSRIGISD VDEPARGAIG DNNDVFDAPE
3841 KRKAETETSS SSANNKLSYS GNIQVNVGDG EFTAVNWGTS NVGIKVGTGG FKSLAFGDNN
3901 VMIHIGNGES KHSFDIGGYQ ALEGAQMFIG NRNVSFNKGR SNDLIVMMDK SIPTPPLVNP
3961 FDGAARISGV LQSIATSGEG KDWLAAQEQQ WTLSGAKKFV KDMSGLDQSS SVDYTSLVEL
4021 DSQNERSSRG LKHDAEAALN KQYNQWLSGN GNNDTSKLSR ADKLRQANEK LAFNFAVGGQ
4081 GADIQVTTGN WNFMFGDNIQ SILDTNLGSL FGLMTQQFSA TGQAKTTFTY TPEDLPRQLK
4141 NKLLGQLAGV GAETTLADIF GVDYTASGHI VSRNGEAVDG VAILKEMLEV IGEFSGDQLQ
4201 AFVDPTKLVN SLEAGINMGA DGIKSFAETH GLKEKAPEEE ESKPSVSLNG ETLNSTQGAT
4261 VADGSTETTE TPDRAFGFNS LNLPNLFATI FSQDKQKEMK SLVANLKENL TADLLNMKEK
4321 TFDFLRNSGH LQGDGDINLS LGNYNFNWGG DGKDLGAYLG DNNNFWGGRG DDVFYATGTS
4381 NIFTGGEGND MGVLMGRENM MFGGDGNDTA VVAGRINHVF LGAGDDQSFV FGEGGEIDTG
4441 SGRDYVVTSG NFNRVDTGDD QDYSVTIGNN NQVELGAGDD FANVFGNYNR INASAGNDVV
4501 KLMGYHAVLN GGEGEDHLIA AAISKFSQFN GGEGRDLMVL GGYQNTFKGG TDVDSFVVSG
4561 DVIDNLVEDI RSEDNIVFNG IDWQKLWFER SGYDLKLSIL RDPASDSDQA KFEHIGSVTF
4621 SDYFNGNRAQ VIIAMGEKDA TGEREYTTLS ESAIDALVQA MSGFDPQAGD NGFIDNLDSK
4681 SRVAITTAWA DVVHKKGITV
//