LOCUS ASM98744.1 4700 aa PRT BCT 14-AUG-2017 DEFINITION Vibrio vulnificus NBRC 15645 = ATCC 27562 RTX toxin protein. ACCESSION CP012882-910 PROTEIN_ID ASM98744.1 SOURCE Vibrio vulnificus NBRC 15645 = ATCC 27562 ORGANISM Vibrio vulnificus NBRC 15645 = ATCC 27562 Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio. REFERENCE 1 (bases 1 to 1741042) AUTHORS Rowe-Magnus,D. and Rusch,D.B. TITLE Direct Submission JOURNAL Submitted (06-OCT-2015) Biology, Indiana University, 1001 E. Third Street, Bloomington, IN 47405, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Celera Assembler v. 8.1 Genome Coverage :: 10x; 100x Sequencing Technology :: PacBio; Illumina ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 10/06/2015 12:48:27 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 3.0 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes :: 4,415 CDS :: 4,220 Pseudo Genes :: 45 rRNAs :: 12, 11, 11 (5S, 16S, 23S) complete rRNAs :: 12, 11, 11 (5S, 16S, 23S) tRNAs :: 115 ncRNA :: 1 ##Genome-Annotation-Data-END## FEATURES Qualifiers source /organism="Vibrio vulnificus NBRC 15645 = ATCC 27562" /mol_type="genomic DNA" /strain="ATCC 27562" /type_material="type strain of Vibrio vulnificus" /db_xref="taxon:1219061" /chromosome="2" /country="USA" /collection_date="1979" protein /locus_tag="AOT11_04645" /inference="EXISTENCE: similar to AA sequence:RefSeq:WP_017422691.1" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 BEGIN 1 MGKPFWRSVE YFFTGNYSAD DGNNSIVAIG FGGEIHAYGG DDHVTVGSIG ATVYTGSGND 61 TVVGGSAYLR VEDTSGHLSV KGAAGYADIN KSGDGNVSFA GAAGGVSIDH LGNHGDVNYG 121 GAAAYNGITR KGLSGNVTFK GAGGYNALWH ETNQGNLSFA GAGAGNKLDR TWFNRYQDSR 181 GDVTFDGAGA ANSISSRVET GNITFRGAGA DNHLVRKGKV GDVTLQGAGA SNRIERTRQA 241 EDVYAQTRGN IRFEGVGGYN SLYSDVAHGD IHFSGGGAYN TIIRKGSGND FAKEGMTNAK 301 ADEIVLTKAV MSGSWIGQDH HVTAVKSASE PNTYLFAFAD STYTKINKVQ LRNDPQTGEL 361 KYYSTAWYKE GNHLSNLANQ DISDNGGFTA VNINGAYTLS DLKVEHQQSL TVHAVEKDLT 421 EYEWVTYANG ALIDAKDVAL SEAKMGGTAI STDGTTVDVQ AVKSNRKPNT YVYAKVLGPY 481 TKIVVVELAN DPKTGALKYQ ARSWYKEGNH TADLANEDIS SANGYHSMGK GGYSLSDLHY 541 SVNAVRSTSE TVADIDEYTD QTLFKPATDS GESSGDVYFN GAGGGNVIKS NVTRGNVYFN 601 GGGIANVILH SSQFGNTEFN GGGAANVIVK SGEEGDLTFR GAGLANVLVH QSKQGKMDVY 661 AGGAVNVLVR IGDGQYLAHL LAYGNISVHK GNGNSRVVML GGYNTHTQIG SGNGLWLAAG 721 GFNVMTQVGK GDVASVLAGG ANVLTKVGDG DLTAGMLGGA NVITHISGDN ETSNTTAVAL 781 GGANILTKKG KGNALAVMGG GANVLTHVGD GTTTGVMVGG ANILTKVGNG DTTGIMLGVG 841 NVLTHVGDGQ TLGVMGAAGN IFTKVGDGTS IAVMIGAGNI FTHVGEGNAW ALMGGLGNVF 901 TKVGNGDALA LMVAEANVFT HIGDGMSVAL MLAKGNVATK VGNGTTLAAM VGNANIFTHV 961 GSGSTFAAMI GQANIMTKVG DDLTAALMVG KANIYTHVGD GTSLGIFAGE VNVMTKVGNG 1021 TTLAAMFGKA NIMTHVGDGL TGVLALGEAN IVTKVGDDFM GVVAAAKANV VTHVGDATTA 1081 AVLAGKGNIL TKVGEGTTVG LLISDIGNVM THVGDGTTIG IAKGKANIIT KVGDGLGVNV 1141 AWGQANVFTQ VGDGDRYNFA KGEANVITKV GDGQEVSVVQ GKANIITHVG NGDDYTGAWG 1201 KANVITKVGN GRNVVLAKGE ANIVTQVGDG DSFNALWSKG NIVTKVGDGM QVTAAKGKAN 1261 ITTTVGDGLS VTAAYGDANI NTKVGDGVSV NVAWGKYNIN TKVGDGLNVA VMKGKANANI 1321 HIGDGLGINA SYAQNNVAIK IGNGDFYSLA VASSNTSSNK LSALFDNIKQ TVLGVGGSQA 1381 INYLVQGDEA SSSGTQKGRG AIATPEITKL DGFQMDAIEE VGSDLGDSLT GSVTKVDTPD 1441 LNKMQNALDV DGSSDQTQAP NLIVNGDFEQ GDQGWKSTHG VEASYSGNVY GVNGEGHGAR 1501 VTELDTYTNT SLYQDLTDLT EGEVIAVSFD FAKRAGLSNN EGIEVLWNGE VVFSSSGDAS 1561 AWQQKTLKLT AHAGSNRIEF KGTGQNDGLG YILDNVVAKS ESSQQANAVS EHATQNQASQ 1621 NALSDKERAE ADRQRLEQEK QKQLDAVAGS QSQLESTDQQ ALENNGQAQR DAVKEESEAV 1681 TAELTKLAQG LDVLDGQATH TGESGDQWRN DFAGGLLDGV QRQLDDAKQL ANDKIAAAKQ 1741 TQSDNNSKVK ESVAKSEAGV AKGEQNRAGA EQDIADAKAD AETRQADAMA KSNDAKQAES 1801 DAHSAANDAQ SRGDRDAMNA ENKANQAQKD AKGTKQNEGD RPDREGVTGS GLSGNAHRVE 1861 GAGETGSHVT NDSQTNADGR FSEGLSEQEQ EALEGATNAV NRLQINAGIR GKNSSSTISS 1921 MFTETNSDSI VVPTAASQDV VRKEIRISGV NLEGLGEASH DTAESLVSAR AEKVANLYRW 1981 LDTDNDAATD KYVPVPGFER VDADVSDEAK ERMIQFVGGY IEHTDNQVPK DQAQALATLF 2041 VEATLDYDWD KRVEFLTKLE SYGYSFEAPH GEKSIVSFWS GRNFKEYRNV LDNAQADGKK 2101 VVYDIDVKGN AFAIDLNKQL MRWGGMFLDP DNAEQNQLKS SIDAATFSNT GFWSSVYATG 2161 AQNDVYVIAE GGMRLGNYFW NVELPALRQL QREGLVGEIR LLDKPVSAYK DIPVEDIGRR 2221 LTDAGVAVKV RFDALSHEKQ ADLLADNPDG YKADTLVELD VKLSAIDSML RESLPFYSLR 2281 TERNLLVQEG EEGFEVRSWP GTDGKSKTIL LDNPEDAAQQ KSIERFILAN FDNFEQMPDE 2341 LFLVDNKVLS HHDGRTRILA QKEDGAWTYN ANVELMSVTE LLDAAHVSGK VRGESYQQVI 2401 DALTEYHAST AEHADYELTS VEKLLNLRKQ VEGYVLGHPD SGRVQAMNAL LNQVNSRLEA 2461 VSVLVVSEQS IKAHDSFSHL YDQLDNANLK ESKHLYLDGN GDFVTKGKGN LANIDKLGGS 2521 DAVLEKVKAA VSHEYGQVVA DTIFAGLSAN DLAKDGKGID IAGLNKVHQA IEQHMSPVSA 2581 TMYIWKPSDH SALGHAALQI GQGRTQLEGQ AAADFNKQNY VSWWPLGSKS SNIRNIFNVA 2641 TEDQPDLKLR WSDFSQPAHQ NDTLEHDMAS EENDGFGLND GETKLKRFVE KLNAAKGIDA 2701 SYKDASEGYA SVLLGNPDML ASTGIPAHVF QPFVDQWNDT SYDMMDVANR FAEELQKQAQ 2761 ASGDPALVEK RIDNVVRLFA ERALEEIEAF KASQADEGRV FRINLEGLDV AAMQAEWNRL 2821 SNDPDARYQL LTKNCSSTVA KVLKAGGADK LIGHTWRPKF GVWTPTELFN FGQALQEAQL 2881 EIAAKKQSHQ ATDLLDALSG NEKRKENVAI ENDGTPPRDK ESLSPLTRFL NNELYGEKDA 2941 RRKIGEITQT LLDHAVENGE SQKVTLKGEA GRLTGYYHQG AASSKGETSA TSGKVVLFLH 3001 GSGSSAEEQA SAIRNHYQKQ GIDMLAVNLR GYGESDGGPS EKGLYQDART MFNYLVNDKG 3061 IDPSNIIIHG YSMGGPIAAD LARYAAQNGQ AVSGLLLDRP MPSMTKAITA HEVANPAGIV 3121 GAIAKAVNGQ FSVEKNLKGL PKETPILLLT DNEGLGEEGE KLRAKLAIAG YNVTGEQTFY 3181 GHEASNRLMG QYADQIVSGL FNAEQAAVEA GEVLKGLEKD FKRYGDALKP DTSVPGKAKD 3241 IRTTKDFLNG YKNDHAKDIV DGFRSDMSIK QLVDLFVKGN WSEEQKGALA WEIESRALKV 3301 TFQNKSEKYN RLFREIASAG VVDAKATEQL APQLMLLNLA NDGFGGRCDP LSKLVLVAKQ 3361 LENDGQVGVA RQLLEKMYSA AAVLSNPTLY SDSEKANASK LLSSLAAIHA KNPMHDTSMK 3421 VWQEKLEGKQ ALTVNGVVEK ITDASANGKP VLLELDAPKH AMAAWAKGSG DERVYGFYDP 3481 NAGIVEFSSA EKFSAYLTRF FGKSDLDMAQ RYELGKNAAG EPIFNRVVVM DGNTLASYKP 3541 TFGDKTTMQG ILDLPVFDAT PIKKTGTSDV DGNAKIVDVT KEALADGKIL HNQNVNDWER 3601 VVVTPTADGG ETRFDGQIIV QMENDAVAAK AAANLAGKHP ESSVVVQLDS DGNYRVVYGD 3661 PSKLDGKLRW QLVGHGRDHS ESNNTRLSGY SADELAVKLA KFQQSFNQAE NVSSKPDHIS 3721 IVGCSLVSDD KQKGFGHQFI NAMDVNGLRV DVSVRSAKVY INEMGRKLYF DGKDSWVNKA 3781 INSKVLLSWN GQGEVVAKDE RIRNGIAEGD IDLSRIGISD VDEPARGAIG DNNDVFDAPE 3841 KRKAETETSS SSANNKLSYS GNIQVNVGDG EFTAVNWGTS NVGIKVGTGG FKSLAFGDNN 3901 VMIHIGNGES KHSFDIGGYQ ALEGAQMFIG NRNVSFNKGR SNDLIVMMDK SIPTPPLVNP 3961 FDGAARISGV LQSIATSGEG KDWLAAQEQQ WTLSGAKKFV KDMSGLDQSS SVDYTSLVEL 4021 DSQNERSSRG LKHDAEAALN KQYNQWLSGN GNNDTSKLSR ADKLRQANEK LAFNFAVGGQ 4081 GADIQVTTGN WNFMFGDNIQ SILDTNLGSL FGLMTQQFSA TGQAKTTFTY TPEDLPRQLK 4141 NKLLGQLAGV GAETTLADIF GVDYTASGHI VSRNGEAVDG VAILKEMLEV IGEFSGDQLQ 4201 AFVDPTKLVN SLEAGINMGA DGIKSFAETH GLKEKAPEEE ESKPSVSLNG ETLNSTQGAT 4261 VADGSTETTE TPDRAFGFNS LNLPNLFATI FSQDKQKEMK SLVANLKENL TADLLNMKEK 4321 TFDFLRNSGH LQGDGDINLS LGNYNFNWGG DGKDLGAYLG DNNNFWGGRG DDVFYATGTS 4381 NIFTGGEGND MGVLMGRENM MFGGDGNDTA VVAGRINHVF LGAGDDQSFV FGEGGEIDTG 4441 SGRDYVVTSG NFNRVDTGDD QDYSVTIGNN NQVELGAGDD FANVFGNYNR INASAGNDVV 4501 KLMGYHAVLN GGEGEDHLIA AAISKFSQFN GGEGRDLMVL GGYQNTFKGG TDVDSFVVSG 4561 DVIDNLVEDI RSEDNIVFNG IDWQKLWFER SGYDLKLSIL RDPASDSDQA KFEHIGSVTF 4621 SDYFNGNRAQ VIIAMGEKDA TGEREYTTLS ESAIDALVQA MSGFDPQAGD NGFIDNLDSK 4681 SRVAITTAWA DVVHKKGITV //