LOCUS       AFI87032.1               988 aa    PRT              BCT 27-JUN-2016
DEFINITION  Aggregatibacter actinomycetemcomitans D7S-1 hypothetical
            protein protein.
ACCESSION   CP003496-1038
PROTEIN_ID  AFI87032.1
SOURCE      Aggregatibacter actinomycetemcomitans D7S-1
  ORGANISM  Aggregatibacter actinomycetemcomitans D7S-1
            Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Aggregatibacter.
REFERENCE   1  (bases 1 to 2308962)
  AUTHORS   Chen,C., Kittichotirat,W., Chen,W., Downey,J.S., Si,Y. and
            Bumgarner,R.
  TITLE     Genome sequence of naturally competent Aggregatibacter
            actinomycetemcomitans serotype a strain D7S-1
  JOURNAL   J. Bacteriol. 192 (10), 2643-2644 (2010)
   PUBMED   20348265
REFERENCE   2  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R.E. and Chen,C.
  TITLE     Evolutionary Divergence of Aggregatibacter actinomycetemcomitans
  JOURNAL   J. Dent. Res. 95 (1), 94-101 (2016)
   PUBMED   26420795
REFERENCE   3  (bases 1 to 2308962)
  AUTHORS   Chen,C., Kittichotirat,W., Chen,W., Downey,J., Si,Y. and
            Baumgarner,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAR-2010) Microbiology, University of Washington, 960
            Republican St. Rosen Building, Seattle, WA 98109, USA
REFERENCE   4  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R. and Chen,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2012) Department of Microbiology, University of
            Washington, 960 Republican St. Rosen Building, Seattle, WA 98109,
            USA
REFERENCE   5  (bases 1 to 2308962)
  AUTHORS   Kittichotirat,W., Bumgarner,R. and Chen,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2014) Division of Periodontolology, Herman Ostrow
            School of Dentistry, University of Southern Californak, 925 W. 34th
            Street, Los Angeles, CA 90089, USA
  REMARK    Sequence update by submitter
COMMENT     On Jun 27, 2016 this sequence version replaced CP003496.1.
            Source of DNA for this strain is available from: Casey Chen,
            Division of Primary Oral Health Care, USC School of Dentistry, 925
            W 34th Street, Los Angeles, CA 90089-0641.
            Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: http://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 24-MAY-2014
            Assembly Method       :: 454 Newbler assembler v. 2.0.00.22
            Assembly Name         :: AaD7S-1v2.0
            Genome Coverage       :: 17.58x
            Sequencing Technology :: 454 Illumina MiSeq
            ##Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider          :: NCBI
            Annotation Date              :: 07/17/2014 13:42:00
            Annotation Pipeline          :: NCBI Prokaryotic Genome Annotation
                                            Pipeline
            Annotation Method            :: Best-placed reference protein set;
                                            GeneMarkS+
            Annotation Software revision :: 2.6 (rev. 440435)
            Features Annotated           :: Gene; CDS; rRNA; tRNA; ncRNA;
                                            repeat_region
            Genes                        :: 2,197
            CDS                          :: 2,041
            Pseudo Genes                 :: 83
            CRISPR Arrays                :: 3
            rRNAs                        :: 19 (5S, 16S, 23S)
            tRNAs                        :: 53
            ncRNA                        :: 1
            Frameshifted Genes           :: 69
            ##Genome-Annotation-Data-END##
FEATURES             Qualifiers
     source          /organism="Aggregatibacter actinomycetemcomitans D7S-1"
                     /mol_type="genomic DNA"
                     /strain="D7S-1"
                     /db_xref="taxon:694569"
     protein         /locus_tag="D7S_01259"
                     /inference="EXISTENCE: similar to AA
                     sequence:RefSeq:WP_014702319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
BEGIN
        1 MTANTQTKRK TKIKLDLDKI NQKAQELSDG HSKCELPVIP LYPVRYGLSL GYLADARDGT
       61 VKNLPDRAPR TIGASPDYEL MQLRQGFVYI YAHTKHRLFS TDDKGKWLVF RYVTNNDDAN
      121 SASDFEQLSH GKNAGLNACF LLCKWGEEGA NGNWTLGQID TKNYPCASHL KSFNTAFVDK
      181 DVDIVDIAYS EYMWSSEIIH LLETKAALRQ AIMTTVRTDA PENHSAPLKS LGTHVLEYQS
      241 GNQSDDFADK TQDWYTKLNS AAIPSPLTGL PDYEEKGLMV ALQDVVGEMH ELQKIIIDLT
      301 EKQKAYYARY AYPIAIGNII DPKIGFDVRG KTYPFKEKER VIAQKGVQGA LISEFNSKMT
      361 ALLNVPFERY EKPINALVKQ VTNLANQRAS FREFFKVSGD IGRYVPKEGC IDRGFYVFYR
      421 LLADFTYGLE CSSDGIAVLE SLFSEHAAPA GKVPTTVGWL KEHSKKVTDA VYGVAMKIPA
      481 RQRQNLLKGY FQAMEHVYLN SGRTMANLVA LRKTQFDKVM AIYGWDEARL VKNADYFFAE
      541 VADKFLDRLM KQDSSRQYKK ERHETGRGKK AIRQELKQIK QTLKEQNRIT LDEIRDLEAR
      601 IQLSERYYGF TGVLAIYAGM LSLNNDLTVP RKLVRTAAGR LALDPVMVKT ADTAYALGLM
      661 GKPGAGIGAL RNLAGASARS VLVGVRALAY TGMVVDGGVL TAVIAFGGLQ EAIVNEDNVS
      721 IVANGAIIAS SSVLVLSGIV AMVSKGTLAS TLGVANPYAL VIVLLGFAAI ALFGSTPLET
      781 WVKKGFWGRK AYFYWNEKRD DVNNQIKRAE ILANENIAEI AKQYLARLEL VTTGQVDAVA
      841 GAGLPMNEQV EDYILISQGF EKELYEYDIQ SGLKINKISR DYYRISCAEF RRTEPTTQNL
      901 VINLYQWGLA QAQPIKRFYA AASGEVTFYL AENNIHIEDI RIVAEFTDKE GDTFTDVYLS
      961 EEFNHRTREL EQRMQKAVED ARDEGYSE
//