LOCUS       AEE73673.1               355 aa    PRT              PLN 20-JUL-2017
DEFINITION  Arabidopsis thaliana cyclophilin 38 protein.
ACCESSION   CP002686-112
PROTEIN_ID  AEE73673.1
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (bases 1 to 23459830)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (bases 1 to 23459830)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
REFERENCE   3  (bases 1 to 23459830)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
FEATURES             Qualifiers
     source          /organism="Arabidopsis thaliana"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     protein         /gene="CYP38"
                     /locus_tag="AT3G01480"
                     /gene_synonym="ARABIDOPSIS CYCLOPHILIN 38"
                     /gene_synonym="ATCYP38"
                     /gene_synonym="cyclophilin 38"
                     /gene_synonym="F4P13.3"
                     /gene_synonym="F4P13_3"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EL136117.1,INSD:EH929089.1,INSD:EH842928.1,
                     INSD:AV441755.1,INSD:EG508836.1,INSD:BP781373.1,
                     INSD:EH830332.1,INSD:DR296556.1,INSD:ES086828.1,
                     INSD:CB262450.1,INSD:EL044295.1,INSD:ES118927.1,
                     INSD:EL116974.1,INSD:EL337440.1,INSD:DR296552.1,
                     INSD:EH880894.1,INSD:EL314360.1,INSD:EL989854.1,
                     INSD:EH967894.1,INSD:AV802274.1,INSD:EH801975.1,
                     INSD:EL014489.1,INSD:EL136489.1,INSD:EL289943.1,
                     INSD:EH875653.1,INSD:EL228570.1,INSD:EH823149.1,
                     INSD:EL259087.1,INSD:BP856616.1,INSD:EG508846.1,
                     INSD:EH859187.1,INSD:BP623389.1,INSD:BP650126.1,
                     INSD:EL139450.1,INSD:EH965253.1,INSD:EL030369.1,
                     INSD:ES007607.1,INSD:EH909802.1,INSD:AV822201.1,
                     INSD:EL197895.1,INSD:ES004018.1,INSD:DR296555.1,
                     INSD:EH872768.1,INSD:DR296553.1,INSD:EL082147.1,
                     INSD:EH838245.1,INSD:BP600218.1,INSD:EH994601.1,
                     INSD:EH800180.1,INSD:EL073939.1,INSD:EH881752.1,
                     INSD:EL209686.1,INSD:EL261162.1,INSD:AA395048.1,
                     INSD:EH855175.1,INSD:EH821110.1,INSD:EL293490.1,
                     INSD:EL228316.1,INSD:EH890113.1,INSD:EH872196.1,
                     INSD:EH973450.1,INSD:EH818220.1,INSD:EL282815.1,
                     INSD:EH950816.1,INSD:BP864914.1,INSD:EL204783.1,
                     INSD:EH802063.1,INSD:EL235209.1,INSD:EL092155.1,
                     INSD:BP847954.1,INSD:F14183.1,INSD:EH991050.1,
                     INSD:EH939816.1,INSD:EL151175.1,INSD:EH847658.1,
                     INSD:EL124633.1,INSD:EH856522.1,INSD:EL275164.1,
                     INSD:EL313606.1,INSD:ES142119.1,INSD:AA712374.1,
                     INSD:EL168661.1,INSD:BP790067.1,INSD:EL021497.1,
                     INSD:BP843868.1,INSD:EH892003.1,INSD:EL055550.1,
                     INSD:EL179318.1,INSD:EL242019.1,INSD:DR296554.1,
                     INSD:EL121815.1,INSD:EL220917.1,INSD:DR296551.1,
                     INSD:EL281942.1,INSD:BP834025.1,INSD:EL179303.1,
                     INSD:ES070132.1,INSD:BP807815.1,INSD:EH821014.1,
                     INSD:EL177777.1,INSD:EH959446.1,INSD:BP638504.1,
                     INSD:EL134457.1,INSD:AV797246.1,INSD:EL250938.1,
                     INSD:AV797448.1,INSD:EL063287.1,INSD:DR347998.1,
                     INSD:ES014923.1,INSD:EH799866.1,INSD:EL168548.1,
                     INSD:EL246315.1,INSD:EL111865.1,INSD:EH954078.1,
                     INSD:AV817020.1,INSD:EH901845.1,INSD:BP844903.1,
                     INSD:DR376400.1,INSD:BP782830.1,INSD:DR296550.1,
                     INSD:EL111983.1,INSD:EL335102.1,INSD:BP862711.1,
                     INSD:EL295772.1,INSD:EH900367.1,INSD:DR296549.1"
                     /note="cyclophilin 38 (CYP38); FUNCTIONS IN:
                     peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN:
                     protein folding, photosystem II assembly, photosystem II
                     stabilization, defense response to bacterium; LOCATED IN:
                     thylakoid, chloroplast thylakoid membrane, chloroplast
                     thylakoid lumen, chloroplast; EXPRESSED IN: 24 plant
                     structures; EXPRESSED DURING: 13 growth stages; CONTAINS
                     InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891),
                     Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
                     (InterPro:IPR002130); BEST Arabidopsis thaliana protein
                     match is: Cyclophilin-like peptidyl-prolyl cis-trans
                     isomerase family protein (TAIR:AT3G15520.1); Has 30201
                     Blast hits to 17322 proteins in 780 species: Archae - 12;
                     Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
                     5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
                     BLink)."
                     /db_xref="TAIR:AT3G01480"
                     /db_xref="Araport:AT3G01480"
     intron_pos      48:0 (1/4)
     intron_pos      146:0 (2/4)
     intron_pos      212:2 (3/4)
     intron_pos      291:1 (4/4)
BEGIN
        1 MAAAFASLPT FSVVNSSRFP RRRIGFSCSK KPLEVRCSSG NTRYTKQRGA FTSLKECAIS
       61 LALSVGLMVS VPSIALPPNA HAVANPVIPD VSVLISGPPI KDPEALLRYA LPIDNKAIRE
      121 VQKPLEDITD SLKIAGVKAL DSVERNVRQA SRTLQQGKSI IVAGFAESKK DHGNEMIEKL
      181 EAGMQDMLKI VEDRKRDAVA PKQKEILKYV GGIEEDMVDG FPYEVPEEYR NMPLLKGRAS
      241 VDMKVKIKDN PNIEDCVFRI VLDGYNAPVT AGNFVDLVER HFYDGMEIQR SDGFVVQTGD
      301 PEGPAEGFID PSTEKTRTVP LEIMVTGEKT PFYGSTLEVS LSKSLLVRDL YYIVF
//